CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67922	Canola	cytosol	34.52	97.9
Bra039194.1-P	Field mustard	plastid	96.59	84.24
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	18.52	74.85
CDX75636	Canola	mitochondrion	80.89	66.83
CDX69288	Canola	plastid	80.3	66.18
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	36.74	61.69
KRH04519	Soybean	plastid	69.48	57.41
KRH57989	Soybean	plasma membrane, plastid	69.48	56.37
VIT_07s0129g01040.t01	Wine grape	plastid	66.22	53.92
PGSC0003DMT400064232	Potato	plastid	62.81	51.9
Solyc02g092920.2.1	Tomato	plastid	62.67	51.52
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	50.81	49.71
Os06t0690700-01	Rice	plastid	60.0	49.27
GSMUA_Achr9P16140_001	Banana	plastid	62.81	49.25
KXG20697	Sorghum	plastid	59.56	48.55
Zm00001d014569_P002	Maize	plastid	59.11	48.48
TraesCS7A01G439100.1	Wheat	plastid	58.96	48.07
TraesCS7D01G428700.1	Wheat	plastid	58.67	47.94
HORVU7Hr1G100160.2	Barley	plastid	58.67	45.47
CDY67984	Canola	cytosol, peroxisome, plasma membrane	9.63	26.53
CDY51647	Canola	golgi, plasma membrane, vacuole	11.26	21.97
CDY69827	Canola	plasma membrane	17.19	18.41
CDY69511	Canola	plasma membrane	18.22	17.18
CDX68625	Canola	plasma membrane	18.22	16.85
CDX68627	Canola	cytosol, plasma membrane, vacuole	18.81	16.75
CDY28160	Canola	cytosol	18.52	16.49
CDX91834	Canola	cytosol, peroxisome, plasma membrane	20.89	16.43
CDY26408	Canola	golgi, nucleus, plasma membrane	4.15	16.18
CDX92394	Canola	plastid	20.89	15.93
CDY16605	Canola	plastid	20.89	15.93
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	12.74	15.75
CDX68986	Canola	plastid	21.33	15.38
CDX75363	Canola	plastid	21.33	15.37
CDY30170	Canola	cytosol, peroxisome, plasma membrane	19.85	15.31
CDY49160	Canola	cytosol	22.07	15.31
CDY28206	Canola	plasma membrane	16.3	15.26
CDY62400	Canola	plasma membrane	19.7	15.25
CDY50396	Canola	cytosol	21.93	15.21
CDX93870	Canola	endoplasmic reticulum, plasma membrane	15.85	14.66
CDY25498	Canola	mitochondrion	22.37	14.6
CDY34353	Canola	mitochondrion	22.22	14.53
CDY50771	Canola	cytosol	21.19	14.39
CDY39400	Canola	cytosol	21.04	14.21
CDY51090	Canola	cytosol	18.81	11.67
CDY36489	Canola	cytosol	18.67	10.97
CDY72630	Canola	golgi, plasma membrane, vacuole	5.19	10.06
CDY51646	Canola	cytosol, plasma membrane, vacuole	2.52	8.72
CDY67659	Canola	cytosol	7.41	8.4
CDY69037	Canola	cytosol	7.26	8.39
CDY08717	Canola	cytosol, nucleus, plasma membrane	18.67	8.08
CDY51690	Canola	cytosol, plasma membrane, vacuole	1.78	7.02
CDY51648	Canola	cytosol	0.3	2.94

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078I5I8	UniProt:A0A078I5I8
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY46080	ProteinID:CDY46080	ProteinID:CDY46080.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00083232001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122
PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0004EEC3DC	SEG:seg	:

Description

BnaA09g42040DBnaA09g42040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5I8]

Coordinates

chrLK032649:-:131788..135659

Molecular Weight (calculated)

73295.4 Da

IEP (calculated)

6.805

GRAVY (calculated)

0.093

Length

675 amino acids

Sequence
(BLAST)

001: MEPAAFTHSS SLTRFPFSLK ATLRLNSLLL QPTTLPIHTS PRRSVHLLTK SACENHSHHH HHEHDHHHHH HHHHHRHCCS VGQTASKYPQ KVLIEFAKAI
101: GWIRLANFLR EHLYLCCTSA VLFITAAACP YLIPKPYIKP LQNSFMIVAF PLVGISASLD AIMDVAGGKV NIHVLMALAA FASVFMGNAL EGGLLLSMFN
201: LAHIAEEFFT SRSMVDVKEL KESNPETALV IDVDNDNVPN FFDLSYKSVH LHNVEVGSYI LVGTGEIVPV DCQVYQGNAT ITVEHLTGEV KPLEAKAGDR
301: WLIFNDVQHV EDLSCARKGI LLKGGQVLDA LASCHTIGFD KTGTLTTGGL TCKAIEPIYG HEEGNNASVT PCCIPNCEKE ALAVVAAMEK GTTHPIGRAM
401: VDHSIGKDLP SVSVESFEYF PGRGLTATVN CVESVTEDSK VQKASLGSVE FITSLFKSQD ESRKIKDAVN SSSYGNDFVH ALLSLDQKVT LIHLEDQPRP
501: EVPKVIAELK SWSRLRIMML TGDHESSAWR VANAVGIDEV YCNLKPEDKL NHVKNISRDS GGGLIMVGEG INDGPALAAA TVGFVLAQRA SGTAIAVADV
601: LLLRDNITGV PFCIAKSRQT TTLVKQNVAI ALTSILLAAL PSVLGYLPLW LTVLLHEGGT LLVCLNSIRG LNDPS

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.