Factsheet for Bra039194.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67922	Canola	cytosol	30.1	97.9
CDY46080	Canola	plastid	84.24	96.59
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	20.03	92.81
Bra011750.1-P	Field mustard	plastid	81.91	77.51
KRH04519	Soybean	plastid	71.19	67.44
KRH57989	Soybean	plasma membrane, plastid	71.19	66.23
VIT_07s0129g01040.t01	Wine grape	plastid	68.09	63.57
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	32.04	61.69
PGSC0003DMT400064232	Potato	plastid	64.6	61.2
Solyc02g092920.2.1	Tomato	plastid	64.47	60.78
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	54.01	60.58
Os06t0690700-01	Rice	plastid	61.89	58.27
Zm00001d014569_P002	Maize	plastid	61.11	57.47
GSMUA_Achr9P16140_001	Banana	plastid	63.82	57.38
KXG20697	Sorghum	plastid	61.37	57.37
TraesCS7A01G439100.1	Wheat	plastid	60.98	57.0
TraesCS7D01G428700.1	Wheat	plastid	60.72	56.9
HORVU7Hr1G100160.2	Barley	plastid	60.72	53.96
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	20.54	20.81
Bra011165.1-P	Field mustard	cytosol	20.16	20.58
Bra002374.1-P	Field mustard	plastid	21.58	18.87
Bra011164.1-P	Field mustard	cytosol, plasma membrane	20.54	18.23
Bra011450.1-P	Field mustard	plastid	21.96	18.09
Bra003110.1-P	Field mustard	cytosol	22.74	18.01
Bra027573.1-P	Field mustard	cytosol	23.0	17.76
Bra024107.1-P	Field mustard	plasma membrane	19.64	17.21
Bra025102.1-P	Field mustard	cytosol	21.45	16.65
Bra027641.1-P	Field mustard	mitochondrion	23.13	15.02
Bra024449.1-P	Field mustard	cytosol	19.77	12.86
Bra038842.1-P	Field mustard	cytosol	20.54	12.51

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra039194	EnsemblPlants:Bra039194.1	EnsemblPlants:Bra039194.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M4FDM3
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0002542E78	SEG:seg	:	:	:

Description

AT4G37270 (E=0.0) HMA1, ATHMA1 | HMA1; ATPase/ cadmium-transporting ATPase/ calcium-transporting ATPase/ copper-exporting ATPase/ zinc transporting ATPase

Coordinates

chrA09:-:31582152..31587402

Molecular Weight (calculated)

83914.7 Da

IEP (calculated)

7.269

GRAVY (calculated)

0.137

Length

774 amino acids

Sequence
(BLAST)

001: MEPTAFTHSS SLTRFPFPLK ATLRLNSLLL QPTTLPIHTS PRRSVHLLTK SACENHSHHH HHEHEHDHHH HHHHRHCCSV GQTASNYPQK VLIEFAKAIG
101: WIRLANFLRE HLHLCCSSAV LFIAAAACPY LIPKPYIKPL QNSFMIVAFP FVGISASLDA IMDVAGGKVN IHVLMALAAF ASVFMGNALE GGLLLSMFNL
201: AHIAEEFFTR RSMVDVKELK ESNPETALVI DVDNDNVPNF FDLSYKSVHL HNVEVGSYIL VGTGEIVPVD CQVYQGNATI TVEHLTGEVK PLEAKAGERV
301: PGGARNLDGR IIVKVMKAWN ESTLNRILQL TEEANSNKPK IQRWLDEFGE IYSKVVVVLS VSIAFLGPVF FKWPFLSTIA CRGSVYRALG FMMAASPCAL
401: AVAPLAYATA ISSCARKGIL LKGGQVLDAL ASCHTIGFDK TGTLTTGGLT CKAIEPIYGH EEGNNASVTP CCIPNCEKEA LAVVAAMEKG TTHPIGRAMV
501: DHSIGKDLPS VSVESFEYFP GRGLTATVNC VQSVTEDSKV QKASLGSVEF ITSLFKSQDE SRKIKDAVNS SSYGNDFVHA LLSLDQKVTL IHLEDQPRPE
601: VPKVIAELKS WGRLRIMMLT GDHESSAWRV ANAVGIDEVY CNLKPEDKLN HVKNISRDSG GGLIMVGEGI NDGPALAAAT VGFVLAQRAS GTAIAVADVL
701: LLRDNITGVP FCIAKSRQTT SLVKQNVAIA LTSILLAALP SVLGYLPLWL TVLLHEGGTL LVCLNSIRGL NDPS

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.