Factsheet for Zm00001d014569_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20697	Sorghum	plastid	95.99	95.41
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	42.89	87.81
TraesCS7A01G439100.1	Wheat	plastid	87.36	86.84
TraesCS7D01G428700.1	Wheat	plastid	87.12	86.8
Os06t0690700-01	Rice	plastid	86.03	86.13
HORVU7Hr1G100160.2	Barley	plastid	86.39	81.63
CDY67922	Canola	cytosol	20.29	70.17
GSMUA_Achr9P16140_001	Banana	plastid	70.47	67.36
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.61	67.07
VIT_07s0129g01040.t01	Wine grape	plastid	64.76	64.29
CDX75636	Canola	mitochondrion	62.7	63.16
Bra011750.1-P	Field mustard	plastid	62.58	62.96
AT4G37270.1	Thale cress	plasma membrane, plastid	62.58	62.88
CDX69288	Canola	plastid	62.45	62.76
KRH04519	Soybean	plastid	61.73	62.18
KRH57989	Soybean	plasma membrane, plastid	62.09	61.42
PGSC0003DMT400064232	Potato	plastid	60.75	61.2
Solyc02g092920.2.1	Tomato	plastid	61.0	61.14
Bra039194.1-P	Field mustard	plastid	57.47	61.11
CDY46080	Canola	plastid	48.48	59.11
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	4.98	22.4
Zm00001d027860_P001	Maize	plasma membrane	4.5	22.02
Zm00001d005190_P001	Maize	plastid	23.82	21.83
Zm00001d005189_P001	Maize	plasma membrane	22.96	19.61
Zm00001d015829_P003	Maize	plasma membrane	22.84	19.18
Zm00001d052801_P004	Maize	plastid	22.11	18.8
Zm00001d002708_P001	Maize	mitochondrion	22.72	18.72
Zm00001d027884_P003	Maize	plastid	20.29	18.51
Zm00001d002705_P002	Maize	cytosol, plastid	22.36	17.76
Zm00001d053783_P001	Maize	plasma membrane	21.51	17.74
Zm00001d019226_P003	Maize	cytosol	17.86	16.46
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	20.05	15.96
Zm00001d014669_P007	Maize	plasma membrane	20.78	15.56

Protein Annotations

EntrezGene:100273554	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6GU98
ProteinID:AQK66549.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006878	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009642	GO:GO:0009941	GO:GO:0009987
GO:GO:0015633	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0019725
GO:GO:0019829	GO:GO:0055069	GO:GO:0071577	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119
ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000220B354	EnsemblPlantsGene:Zm00001d014569	EnsemblPlants:Zm00001d014569_P002
EnsemblPlants:Zm00001d014569_T002	SEG:seg	:	:	:	:

Description

Probable cadmium/zinc-transporting ATPase HMA1 chloroplastic

Coordinates

chr5:+:53736832..53758491

Molecular Weight (calculated)

87516.1 Da

IEP (calculated)

7.474

GRAVY (calculated)

0.186

Length

823 amino acids

Sequence
(BLAST)

001: MQFLSASASA SSLVPPSAHL LRLSRPQPFP QLLRRRSPPR PLALTPRLPL PLVSRPSLLS TPRAHGGHGH GHHHGHDHHH HHGHGHGHGH HEVDVHGGGG
101: GAAVMRVARA IGWANVADAL REHLHLCCIS LGLLLIAAAC PHVALLNSVS RLQAALIAVA FPLVGVSAAL DALVNIADGR INIHVLMALA AFASIFMGNA
201: LEGGLLLAMF NLAHIAEEYF TSKSMFDVRE LKENHPEFAL LLETSGEESV QFSNLSYTKV PVHDLDVGSH ILVRAGEAVP VDGEVYQGSS TVTIEHLTGE
301: TKPLERTVGD AIPGGARNLE GMMIVKVTKS WEDSTLNRIV QLTEEGQLNK PKLQRWLDEF GEYYSRVVVA LSLVVALLGP LLFKWPFFGN SVCRGSIYRG
401: LGLMVAASPC ALAVAPLAYA TAISSLASKG ILLKGGHVLD ALSSCQSIAF DKTGTLTTGK LMCKAIEPIH GHLGVKSGRS NPSCCTPNCE SEALAVAAAM
501: EKGTTHPIGR AVLDHSVGKE LPVVAVESFE CLPGRGVVAT LSGVKVRENE NELSEASIGS VDYISSLYRS NGESEQIRAA AKSSAYGPEF VQAALSVDKK
601: VTLFHFEDEP RSGVCEVIST LREKAKLRIM MLTGDHESSA QRVAKAVCIE EVHFSLKPED KLNKVKAVSR EGGGGLIMVG DGINDAPALA AATVGMVLAQ
701: RASATAVAVA DVLLLQDNIC GVPFCIAKAR QTTSLVKQSV ALALTCIVFA ALPSVLGFLP LWLTVLLHEG GTLLVCLNSI RALNTPTWSL VDDIRKLVDS
801: LRNYFPSKFN SSPSSYTANT APL

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.