Factsheet for TraesCS7D01G428700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	47.82	98.26
TraesCS7A01G439100.1	Wheat	plastid	98.31	98.07
HORVU7Hr1G100160.2	Barley	plastid	96.97	91.96
KXG20697	Sorghum	plastid	87.89	87.68
Zm00001d014569_P002	Maize	plastid	86.8	87.12
Os06t0690700-01	Rice	plastid	86.56	86.98
CDY67922	Canola	cytosol	20.1	69.75
GSMUA_Achr9P16140_001	Banana	plastid	70.46	67.6
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.44	66.47
VIT_07s0129g01040.t01	Wine grape	plastid	65.38	65.14
KRH04519	Soybean	plastid	62.59	63.28
CDX75636	Canola	mitochondrion	62.23	62.91
Bra011750.1-P	Field mustard	plastid	62.11	62.71
CDX69288	Canola	plastid	62.11	62.64
KRH57989	Soybean	plasma membrane, plastid	62.95	62.5
AT4G37270.1	Thale cress	plasma membrane, plastid	61.86	62.39
PGSC0003DMT400064232	Potato	plastid	61.26	61.93
Solyc02g092920.2.1	Tomato	plastid	61.5	61.88
Bra039194.1-P	Field mustard	plastid	56.9	60.72
CDY46080	Canola	plastid	47.94	58.67
TraesCS5D01G392700.1	Wheat	plasma membrane	23.12	22.39
TraesCS7D01G237500.1	Wheat	plastid	22.76	19.75
TraesCS4D01G292300.2	Wheat	plastid	20.58	19.12
TraesCS6D01G153600.1	Wheat	cytosol	22.4	18.57
TraesCS7D01G412800.1	Wheat	plasma membrane	21.19	18.52
TraesCS2D01G407800.5	Wheat	plastid	22.16	18.3
TraesCS7D01G467100.1	Wheat	cytosol	21.67	17.88
TraesCS6D01G146500.1	Wheat	cytosol	21.19	17.54
TraesCS7D01G412400.1	Wheat	plasma membrane	21.07	17.35

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006812	GO:GO:0006878	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009642	GO:GO:0009941	GO:GO:0009987	GO:GO:0015633	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0019725	GO:GO:0019829	GO:GO:0055069	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G428700	EnsemblPlants:TraesCS7D01G428700.1
TIGR:cd02079	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:548885465..548893867

Molecular Weight (calculated)

87774.3 Da

IEP (calculated)

7.401

GRAVY (calculated)

0.177

Length

826 amino acids

Sequence
(BLAST)

001: MQFLTASAAC SSSAPRPAHL LRVSRPPPFP QPRRRRAPHL PSAALSLAPR PPLLLASRRS LLFTPRAHGD HHHHHGHTHH GHGHSHGHHG HGHGHGGADV
101: RGGGGGAAVM RMARAIGWAD VADALREHLQ LCCISLALLL MAAVCPHVPL LNSVGRLPAA LIAVAFPLVG VSAALDALVD IADGKINIHV LMALAAFASI
201: FMGNSLEGGL LLAMFNLAHI AEEYFTSKSM YDVRELKENH PEFALLLETS GDESAHFSNL NYAKVPVHDL EVGSHILVRA GEAVPVDGEV YQGSSTITIE
301: HLTGETKPVE RTVGDAIPGG ARNLEGMMIV KVTKSWEDST LNRIVQLTEE GQLNKPKLQR WLDEFGEHYS KVVVALSLAV ALLGPFLFNW PFFGNSVCRG
401: SIYRGLGLMV AASPCALAVA PLAYATAISS LASKGILLKG GHVLDALSSC QSIAFDKTGT LTTGKLMCKA IEPIHGHLDA SNGVDPSCCT PNCESEALAV
501: AAAMEKGTTH PIGRAVLKHS VGRDLPVVAV ESFESLPGRG VVATLSGIKA RDNENEFAKA SIGSVEYISS LYRSYGESEQ IKEAVKCSAF GPEFVQAALS
601: VDKKVTLFHF EDEPRTGVCE VIYTLREKAK LRIMMLTGDH ESSAQRVAKA VCIEEVHFSL KPEDKLNKVK AVSREGGGGL IMVGDGINDA PALAAATVGI
701: VLAQRASATA VAVADVLLLQ DNLCVVPFCI AKARQTTSLV KQSVALALTC IVFAALPSVL GFLPLWLTVL LHEGGTLLVC LNSIRALNPP TWSWADDIRQ
801: LVHSLKNHVS AKLNSSSDCS ASTVPL

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.