Factsheet for TraesCS4D01G292300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	79.53	96.32
TraesCS4A01G010800.1	Wheat	mitochondrion	95.73	95.62
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	65.69	94.04
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	79.64	93.04
Os03t0178100-00	Rice	plastid	85.15	83.92
KXG40056	Sorghum	plastid	83.69	82.67
Zm00001d027884_P003	Maize	plastid	82.9	81.71
GSMUA_Achr8P30620_001	Banana	cytosol	65.8	72.76
AT5G21930.1	Thale cress	plastid	62.43	62.85
VIT_04s0008g01960.t01	Wine grape	plastid	62.77	62.84
Bra002374.1-P	Field mustard	plastid	62.43	62.71
CDY16605	Canola	plastid	62.43	62.71
CDX92394	Canola	plastid	62.43	62.71
KRH52252	Soybean	plastid	62.77	61.79
Solyc08g061610.2.1	Tomato	plastid	61.98	61.63
KRH61581	Soybean	plastid	33.41	58.81
TraesCS7D01G237500.1	Wheat	plastid	39.6	36.97
TraesCS6D01G153600.1	Wheat	cytosol	29.13	26.0
TraesCS6D01G146500.1	Wheat	cytosol	29.13	25.95
TraesCS2D01G407800.5	Wheat	plastid	29.02	25.8
TraesCS7D01G467100.1	Wheat	cytosol	28.68	25.47
TraesCS5D01G392700.1	Wheat	plasma membrane	22.95	23.92
TraesCS7D01G428700.1	Wheat	plastid	19.12	20.58
TraesCS7D01G412800.1	Wheat	plasma membrane	21.15	19.89
TraesCS7D01G412400.1	Wheat	plasma membrane	20.92	18.54

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006825	GO:GO:0008150	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0046872	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G292300
EnsemblPlants:TraesCS4D01G292300.2	TIGR:cd00371	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:-:463403160..463409561

Molecular Weight (calculated)

92779.8 Da

IEP (calculated)

6.361

GRAVY (calculated)

0.208

Length

889 amino acids

Sequence
(BLAST)

001: MATAPASPLL HVRAQIPSAN PLLFARRLRL PRSRRSAAAS QQRLRLIPRE LSAGSPRAAA DPSASTAVDV PPAAEEGASA TVLLDVSGMM CGGCAARVRS
101: ILAADARVEN AAVNLLAESA AVRLRSPAPG AGEELAERLT VCGFPSAARR GGAAAGAAES ALKWREMAAR KSELLTRSRG RVAFAWTLVA LCCGSHASHL
201: LHSLGIHIGH GTFLDVLHNS YVKCGIAVVA LFGPGRDILF DGLRAFKQGS PNMNSLVGFG SAAAFAISAV SLLNPELAWN STFFDEPVML LGFVLLGRSL
301: EESARLKASS DMNELISLLS PQSRLVVTSS SEDLPSDGIL NSDAITVEVP VDDVRVGDSV LVLPGETIPV DGNVTGGSSF VDESMLTGES LPVAKEKGCP
401: VFSGTVNWDG PLRIKATTTG PSSTIAKIIR MVEDAQAHEA PVQRLADAIA GPFVYTVMTL SAATFSFWYL LGTHLFPEVL LNDISGPDGD SLLLSLKLAV
501: DVLVVSCPCA LGLATPTAIL IGTSMGAKRG LLIRGGDVLE RLAGIDAIVL DKTGTLTKGK PVVTSIASLA YDGMEILRLA AAVEKTALHP IANAITKEAE
601: LCKLDIPTTS GQLTQPGFGC LAEVDGRLVA VGNLDWVHNR FETKASPTEL SDLGKRLEFV PSSEASSSNQ SKSIAYIGRE GEGIIGAIAI SDVLRDDAKS
701: TVDRLKQEGI ATYILSGDRK EAVEGIGETV GIRSENRRSS LTPQEKAGII STLQGEGHRV AMVGDGINDA PSLAAADVGI AMRTHSKENA ASDAASVVLL
801: GNRLSQVVDA LSLSKATMAK VHQNLAWAVA YNIVAIPIAA GALLPQFDFA MTPSLSGGLM ALSSIFVVSN SLLLQLHGSF QKAEKTRTG

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.