CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002374.1-P	Field mustard	plastid	98.53	98.53
CDX92394	Canola	plastid	98.53	98.53
AT5G21930.1	Thale cress	plastid	91.3	91.51
GSMUA_Achr8P30620_001	Banana	cytosol	64.18	70.65
VIT_04s0008g01960.t01	Wine grape	plastid	70.51	70.27
KRH52252	Soybean	plastid	69.83	68.44
Solyc08g061610.2.1	Tomato	plastid	68.59	67.9
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	56.27	67.85
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	56.27	65.44
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	45.65	65.06
KRH61581	Soybean	plastid	36.72	64.36
KXG40056	Sorghum	plastid	63.73	62.67
TraesCS4D01G292300.2	Wheat	plastid	62.71	62.43
Zm00001d027884_P003	Maize	plastid	63.62	62.42
Os03t0178100-00	Rice	plastid	63.28	62.08
TraesCS4A01G010800.1	Wheat	mitochondrion	62.37	62.02
CDX68986	Canola	plastid	41.24	39.0
CDX75363	Canola	plastid	41.02	38.74
CDY26408	Canola	golgi, nucleus, plasma membrane	7.23	36.99
CDY67984	Canola	cytosol, peroxisome, plasma membrane	9.83	35.51
CDX91834	Canola	cytosol, peroxisome, plasma membrane	28.59	29.49
CDY51647	Canola	golgi, plasma membrane, vacuole	10.96	28.03
CDY50396	Canola	cytosol	30.62	27.85
CDY50771	Canola	cytosol	31.19	27.77
CDY39400	Canola	cytosol	31.3	27.73
CDY49160	Canola	cytosol	30.28	27.54
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	5.08	26.95
CDX93870	Canola	endoplasmic reticulum, plasma membrane	21.69	26.3
CDY69827	Canola	plasma membrane	18.42	25.87
CDY34353	Canola	mitochondrion	30.06	25.78
CDY67922	Canola	cytosol	6.89	25.63
CDY25498	Canola	mitochondrion	29.94	25.63
CDY28160	Canola	cytosol	21.02	24.54
CDX68627	Canola	cytosol, plasma membrane, vacuole	20.9	24.41
CDY69511	Canola	plasma membrane	18.87	23.32
CDY30170	Canola	cytosol, peroxisome, plasma membrane	22.49	22.74
CDY72630	Canola	golgi, plasma membrane, vacuole	8.93	22.7
CDX68625	Canola	plasma membrane	18.53	22.47
CDY62400	Canola	plasma membrane	22.03	22.36
CDX75636	Canola	mitochondrion	19.89	21.54
CDX69288	Canola	plastid	19.77	21.37
CDY69037	Canola	cytosol	13.9	21.06
CDY46080	Canola	plastid	15.93	20.89
CDY67659	Canola	cytosol	13.79	20.5
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	12.32	19.96
CDY28206	Canola	plasma membrane	15.59	19.14
CDY51690	Canola	cytosol, plasma membrane, vacuole	3.39	17.54
CDY51090	Canola	cytosol	21.36	17.37
CDY36489	Canola	cytosol	22.37	17.23
CDY51646	Canola	cytosol, plasma membrane, vacuole	3.62	16.41
CDY08717	Canola	cytosol, nucleus, plasma membrane	22.26	12.64
CDY51648	Canola	cytosol	0.34	4.41

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078FQ80
UniProt:A0A078FQ80	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY16605
ProteinID:CDY16605	ProteinID:CDY16605.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00094418001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0004EDBE6D	SEG:seg	:	:

Description

BnaC09g36680DBnaC09g36680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ80]

Coordinates

chrLK032065:+:642742..649651

Molecular Weight (calculated)

94447.9 Da

IEP (calculated)

6.261

GRAVY (calculated)

0.145

Length

885 amino acids

Sequence
(BLAST)

001: MATNLLRLTL PPPSSLHFRS GKFLDAKFSK RIFPRHRRSR IQRHCSKRSL LVSNSIEITT QSLESTIESV KSVASDDKPV LLDVSGMMCG GCVARVKSVL
101: MSDDRVASAV VNMLTETAAV RLKPEVEEAM ADAAESLAKR LTESGFEAKR RVSGMGVAEN VKKWKEMVSK KEELLVKSRN RVAFAWTLVA LCCGSHTSHI
201: LHSVGIHIAH GGFWDLLHNS YVKGGLAVGA LLGPGRELLF DGIKAFGKRS PNMNSLVGLG SMAAFAISLI SLVNPDLEWD ASFFEEPVML LGFVLLGRSL
301: EERAKLKASS DMNELLSLIS TQSRLVITSS DNNTAADSVL SSDSICINVP VDEIRVGDSL LVLPGETFPV DGNVLAGRSV VDESMLTGES LPVYKEEGCS
401: VSAGTINWDG PLRIEASSTG SNSTISKIVK MVEEAQGNAA PVQRLADAIA GPFVYTIMSL SAVTFAFWYY IGSHIFPDVL LNDIAGPDGD PLALSLKLAV
501: DVLVVSCPCA LGLATPTAIL IGTSLGAKRG YLIRGGDVLE RLASIDCVAL DKTGTLTEGR PIVSGVGSLI YEEQEVLKLA AAVEKTATHP IAKAIVNEAE
601: ALNLETPETR GQLTEPGFGT LAEIDGRLVA VGALEWVANR FHKKNDSSDV VKLENYLDRK LSSTSLTSRY SKTVVYVGRE GEGIIGAIAI SDCLRKDAEF
701: TVARLQEKGI KTILLSGDRE GAVATVAKNV GIETESTNYS LSPDKKFEFI SNLQSSGHRV AMVGDGINDA PSLAQADVGI ALKIEAQENA ASNAASVILV
801: RNKLSHVVDA LSLAQATMSK VYQNLAWAIA YNVISIPIAA GVLLPRYDFA MTPSLSGGLM ALSSIFVVSN SLLLQLHKSE TSANS

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.