Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G63440.1 | CDY00957 | AT1G66240.1 | 16367966 |
| AT1G63440.1 | CDY08589 | AT1G66240.1 | 16367966 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49160 | Canola | cytosol | 95.68 | 95.68 |
| PGSC0003DMT400032161 | Potato | cytosol, plasma membrane, vacuole | 11.82 | 87.12 |
| AT1G63440.1 | Thale cress | mitochondrion | 82.63 | 80.8 |
| CDX91834 | Canola | cytosol, peroxisome, plasma membrane | 70.2 | 79.6 |
| KRH41158 | Soybean | plasma membrane | 55.09 | 79.06 |
| VIT_02s0025g03640.t01 | Wine grape | golgi, peroxisome, plasma membrane | 40.29 | 79.03 |
| GSMUA_Achr5P12290_001 | Banana | plasma membrane | 45.22 | 78.57 |
| KRH59857 | Soybean | cytosol | 19.12 | 75.92 |
| CDY34353 | Canola | mitochondrion | 79.24 | 74.71 |
| CDY25498 | Canola | mitochondrion | 78.62 | 73.98 |
| CDX93870 | Canola | endoplasmic reticulum, plasma membrane | 54.06 | 72.05 |
| HORVU2Hr1G097010.1 | Barley | plasma membrane | 48.92 | 70.83 |
| KRG95266 | Soybean | cytosol | 70.61 | 69.82 |
| Solyc08g080870.2.1 | Tomato | cytosol | 68.04 | 69.39 |
| KRH77528 | Soybean | mitochondrion | 60.23 | 67.75 |
| Os04t0556000-01 | Rice | plastid | 65.67 | 63.77 |
| Zm00001d002708_P001 | Maize | mitochondrion | 65.06 | 63.36 |
| GSMUA_Achr5P12300_001 | Banana | cytosol | 51.9 | 63.36 |
| EES11247 | Sorghum | mitochondrion | 65.16 | 63.27 |
| TraesCS2B01G429200.2 | Wheat | mitochondrion | 63.41 | 62.07 |
| TraesCS2D01G407800.5 | Wheat | plastid | 63.62 | 61.9 |
| TraesCS2A01G410400.3 | Wheat | mitochondrion | 63.41 | 61.03 |
| Zm00001d002705_P002 | Maize | cytosol, plastid | 64.65 | 60.71 |
| GSMUA_Achr1P00300_001 | Banana | cytosol | 53.13 | 58.82 |
| CDY67984 | Canola | cytosol, peroxisome, plasma membrane | 14.7 | 58.37 |
| KXG26864 | Sorghum | cytosol, plasma membrane, plastid | 64.44 | 57.95 |
| CDY26408 | Canola | golgi, nucleus, plasma membrane | 8.53 | 47.98 |
| CDY50771 | Canola | cytosol | 46.04 | 45.07 |
| CDY39400 | Canola | cytosol | 46.15 | 44.94 |
| CDY69037 | Canola | cytosol | 22.2 | 36.99 |
| CDY67659 | Canola | cytosol | 22.2 | 36.3 |
| VIT_02s0025g03630.t01 | Wine grape | cytosol | 70.5 | 35.43 |
| CDX92394 | Canola | plastid | 27.95 | 30.73 |
| CDY16605 | Canola | plastid | 27.85 | 30.62 |
| CDY51647 | Canola | golgi, plasma membrane, vacuole | 10.59 | 29.77 |
| CDX68986 | Canola | plastid | 27.65 | 28.74 |
| CDX75363 | Canola | plastid | 27.65 | 28.71 |
| CDY67923 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 4.73 | 27.54 |
| CDY69827 | Canola | plasma membrane | 16.96 | 26.19 |
| CDY67922 | Canola | cytosol | 6.37 | 26.05 |
| CDX68627 | Canola | cytosol, plasma membrane, vacuole | 19.53 | 25.07 |
| CDY69511 | Canola | plasma membrane | 17.99 | 24.44 |
| CDY28160 | Canola | cytosol | 18.91 | 24.27 |
| CDX68625 | Canola | plasma membrane | 17.78 | 23.7 |
| CDY30170 | Canola | cytosol, peroxisome, plasma membrane | 20.66 | 22.97 |
| CDY62400 | Canola | plasma membrane | 20.45 | 22.82 |
| CDX69288 | Canola | plastid | 19.12 | 22.71 |
| CDX75636 | Canola | mitochondrion | 19.01 | 22.64 |
| CDY72630 | Canola | golgi, plasma membrane, vacuole | 7.91 | 22.13 |
| CDY46080 | Canola | plastid | 15.21 | 21.93 |
| CDY28206 | Canola | plasma membrane | 15.31 | 20.67 |
| CDX68623 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 11.41 | 20.33 |
| CDY51090 | Canola | cytosol | 19.42 | 17.37 |
| CDY36489 | Canola | cytosol | 19.32 | 16.36 |
| CDY51646 | Canola | cytosol, plasma membrane, vacuole | 3.08 | 15.38 |
| CDY51690 | Canola | cytosol, plasma membrane, vacuole | 2.67 | 15.2 |
| CDY08717 | Canola | cytosol, nucleus, plasma membrane | 19.42 | 12.12 |
| CDY51648 | Canola | cytosol | 0.21 | 2.94 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | GO:A0A078IK73 |
| UniProt:A0A078IK73 | InterPro:ATPase_P-typ_P_site | InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | EnsemblPlants:CDY50396 |
| ProteinID:CDY50396 | ProteinID:CDY50396.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 | GO:GO:0046872 |
| GO:GO:0099132 | EnsemblPlantsGene:GSBRNA2T00096620001 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom |
| InterPro:HMA_dom_sf | InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-typ_ATPase_IB |
| PFAM:PF00122 | PFAM:PF00403 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00942 | ScanProsite:PS00154 |
| ScanProsite:PS01047 | PFscan:PS50846 | PANTHER:PTHR24093 | PANTHER:PTHR24093:SF417 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 |
| SUPFAM:SSF56784 | SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 |
| TMHMM:TMhelix | UniParc:UPI0004EB76A5 | SEG:seg | : | : | : |
Description
BnaC09g28870DBnaC09g28870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK73]
Coordinates
chrLK032906:+:30237..33755
Molecular Weight (calculated)
105943.0 Da
IEP (calculated)
6.643
GRAVY (calculated)
0.173
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MALTSIGEET YSARHPLLQK NKFGGGCRSS SEEEATSKAV FRVVGMTCSA CAGPVEEAIK RLRGIHEAVI DVLNNQAQVL FNPNFVNLEK ICETIQDAGF
101: EASLIENEAN ETSIKVCRIR INGMTCSSCS STIERVLRVT NGVQRAHVSL ALEEAEVHYD RRLGDHDKLL DEIESAGFEA LLISTGEDLS KIDLKIVGEC
201: VDESIKTLLE ALPGVQSVEF HHGTDKIISV LYKHDVTGPR SFIRVFGRTK LKATIFSAGE EGRESQRQVE IKKYYKSFIW SLVFTVPVFL TAMVFMYIPW
301: INHLLMFKVI NMLNTGEIIR CVLATPVQFL IGWRFYYGSY KALRRGSANM DVLIALGTNA AYFYSLYSVL RAASSPGFKG EDFFETSSML ITFILLGKYL
401: EVMAKGKTSD AISKLMKLTP DTAILLSLDS EGQVTGEEEI DGRLIQKNDV IKILPGVKVA SDGYVVWGKS HVDESMMTGE ANLVAKRKGD TVIGGTLNAN
501: GVLHVKVTRV GSESALAQII RLVESAQLAK APVQKLADTI SKFFVPLVIS FSLLTWLVWF FAGKLHWYSE SWIPASMDRF ELALQFGISV MVVACPCALG
601: LATPTAVMVG TGVGASQGVL IKGGQALERA HMVNCIVFDK TGTLTMGKPV VVKTKLLKNM TLGEFYELVA ATEVNSEHPL AKAIVNHAKK FRDDEENPAW
701: PQAHEFLSIT GNGVKATVKG REVMVGNKNL MSQHGVYIPE DAEEMLAEAE EMAQTGILVS VNRELTGLLA VSDPLKPSAR AAISILKSMN IASIMVTGDN
801: WGTANAIARE VGIDSVMAEA KPKQKAEKVK ELQASGHVVA MVGDGINDAP ALVAADVGIA IGAGTDIAIE AADIVLMKSN LEDVITAIDL SKKTFSRIRL
901: NYVWALGYNL IGIPIAAGVL FPWTHLRLPP WFAGAAMAAS SVSVVCSSLL LKNYKRPKML DNLEICEVLV ERV
101: EASLIENEAN ETSIKVCRIR INGMTCSSCS STIERVLRVT NGVQRAHVSL ALEEAEVHYD RRLGDHDKLL DEIESAGFEA LLISTGEDLS KIDLKIVGEC
201: VDESIKTLLE ALPGVQSVEF HHGTDKIISV LYKHDVTGPR SFIRVFGRTK LKATIFSAGE EGRESQRQVE IKKYYKSFIW SLVFTVPVFL TAMVFMYIPW
301: INHLLMFKVI NMLNTGEIIR CVLATPVQFL IGWRFYYGSY KALRRGSANM DVLIALGTNA AYFYSLYSVL RAASSPGFKG EDFFETSSML ITFILLGKYL
401: EVMAKGKTSD AISKLMKLTP DTAILLSLDS EGQVTGEEEI DGRLIQKNDV IKILPGVKVA SDGYVVWGKS HVDESMMTGE ANLVAKRKGD TVIGGTLNAN
501: GVLHVKVTRV GSESALAQII RLVESAQLAK APVQKLADTI SKFFVPLVIS FSLLTWLVWF FAGKLHWYSE SWIPASMDRF ELALQFGISV MVVACPCALG
601: LATPTAVMVG TGVGASQGVL IKGGQALERA HMVNCIVFDK TGTLTMGKPV VVKTKLLKNM TLGEFYELVA ATEVNSEHPL AKAIVNHAKK FRDDEENPAW
701: PQAHEFLSIT GNGVKATVKG REVMVGNKNL MSQHGVYIPE DAEEMLAEAE EMAQTGILVS VNRELTGLLA VSDPLKPSAR AAISILKSMN IASIMVTGDN
801: WGTANAIARE VGIDSVMAEA KPKQKAEKVK ELQASGHVVA MVGDGINDAP ALVAADVGIA IGAGTDIAIE AADIVLMKSN LEDVITAIDL SKKTFSRIRL
901: NYVWALGYNL IGIPIAAGVL FPWTHLRLPP WFAGAAMAAS SVSVVCSSLL LKNYKRPKML DNLEICEVLV ERV
001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV
Arabidopsis Description
HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.