CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41158	Soybean	plasma membrane	68.6	99.56
KRH59857	Soybean	cytosol	22.46	90.2
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	12.09	90.15
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	43.6	86.49
KRH77528	Soybean	mitochondrion	70.53	80.23
Solyc08g080870.2.1	Tomato	cytosol	74.49	76.83
CDX91834	Canola	cytosol, peroxisome, plasma membrane	66.26	75.99
AT1G63440.1	Thale cress	mitochondrion	76.52	75.68
KRH77529	Soybean	cytosol	71.65	72.16
KRH27938	Soybean	plasma membrane	20.73	71.83
CDY49160	Canola	cytosol	69.82	70.61
CDY50396	Canola	cytosol	69.82	70.61
CDY34353	Canola	mitochondrion	73.88	70.45
Bra003110.1-P	Field mustard	cytosol	69.92	70.42
CDY25498	Canola	mitochondrion	73.78	70.21
CDX93870	Canola	endoplasmic reticulum, plasma membrane	50.61	68.22
Bra027641.1-P	Field mustard	mitochondrion	75.51	62.33
KRH66147	Soybean	cytosol	52.64	54.3
KRH07428	Soybean	cytosol	49.29	53.12
KRH37212	Soybean	cytosol	47.87	47.77
KRH12191	Soybean	cytosol	47.66	47.09
KRH58516	Soybean	cytosol	46.95	46.48
KRH42397	Soybean	cytosol	46.44	45.98
VIT_02s0025g03630.t01	Wine grape	cytosol	80.49	40.91
KRH58274	Soybean	plasma membrane	25.61	34.19
KRH61581	Soybean	plastid	16.36	31.88
KRH52252	Soybean	plastid	27.64	30.12
KRH42155	Soybean	plastid	27.95	29.35
KRH02816	Soybean	plasma membrane	19.0	25.0
KRH37273	Soybean	cytosol, plasma membrane, vacuole	20.63	22.94
KRH57989	Soybean	plasma membrane, plastid	19.31	22.84
KRH04519	Soybean	plastid	18.6	22.4
KRH19069	Soybean	plasma membrane	21.04	18.89

Protein Annotations

EntrezGene:100789164	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02012098	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_19G140000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046872	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS
UniProt:I1N912	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRG95266	ProteinID:KRG95266
ProteinID:KRG95266.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000233EA23	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:40144260..40149480

Molecular Weight (calculated)

106940.0 Da

IEP (calculated)

7.475

GRAVY (calculated)

0.138

Length

984 amino acids

Sequence
(BLAST)

001: MATKFLALAC LRNNEGSGYL SPRPHYPSMP KYPKGVTEEE GSSNVSSKAL FSVVGMTCSA CAASVEKAVK RLPGIRQAVV DVLNNRAQVL FYPSFVNEET
101: IREVIEDAGF QATFIRDDNE TSVQICRIRI QGMTCTSCSS TVESALQSIQ GVVKAQVALA TEEAEVHYTP NVVTYNQILE AVEDTGFQAT LISTGEDMSR
201: IDIQVEGIRT GRSMRLIENS LQALPGVQGV ETHPEFNKVS LSYKPDLTGP RNFINVIEET GSRRFKAKIF PEEGGRRNSH RREEIRQYYR SFLWSLVLTI
301: PVFLTSMVLM YIPGIKHGVD AKVVNMLTVG EIIRWVLATP VQFIIGKRFY SGAYKALRLG SPNMDVLIAL GTNAAYFYSV YSVLRAATSQ GFKGTDFFET
401: SAMLISFILL GKYLEVLAKG KTSNAIAKLM NLTPDTAILL TLDSEGNVVG EEEIDSRLIQ KNDVIKVIPG AKVAADGFVI WGQSHVNESM ITGEARPVAK
501: RKGETVIGGT VNENGVLHVK ATWVGSESAL SQIVRLVESA QMAKAPVQKF ADRISKYFVP LVILISFSTW LAWFLAGRFH AYPKSWIPSS MDSFQLALQF
601: GISVMVIACP CALGLATPTA VMVGTGVGAS QGILIKGGQA LENTHKVNCV VFDKTGTLTI GKPVVVNTKL LTNMVLREFY ELVAAAEVNS EHPLAKAIVE
701: YAKKLRDDEN PIWPEARDFV SIAGHGVKAM VRNKEILVGN KSLMEDHNVA LPIDAEEMLA EAEAMAQTGI IVSINREVVG VLAVSDPLKP AAQEVISILK
801: SMKIRSIMVT GDNWGTANSI AREVGIETVI AEAKPDQKAE KVKDLQASGC RVAMVGDGIN DSPALVAADV GMAIGAGTDI AIEAADIVLM KSNLEDVITA
901: IDLSRKTFSR IRLNYIWALG YNLLGIPIAA GALFPSTQFR LPPWIAGAAM AASSVSVVCC SLMLKYYRRP KKLDNLEIRG ISIE

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.