Factsheet for Bra003110.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
plasma membrane 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra029854.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63440.1	Bra029854.1-P	AT1G66240.1	16367966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49160	Canola	cytosol	98.26	98.66
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	11.87	87.88
AT1G63440.1	Thale cress	mitochondrion	81.17	79.7
KRH41158	Soybean	plasma membrane	54.66	78.76
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	39.71	78.23
GSMUA_Achr5P12290_001	Banana	plasma membrane	44.32	77.32
KRH59857	Soybean	cytosol	18.94	75.51
HORVU2Hr1G097010.1	Barley	plasma membrane	48.52	70.54
KRG95266	Soybean	cytosol	70.42	69.92
Solyc08g080870.2.1	Tomato	cytosol	67.45	69.08
KRH77528	Soybean	mitochondrion	59.37	67.05
Bra027641.1-P	Field mustard	mitochondrion	79.53	65.18
Os04t0556000-01	Rice	plastid	64.79	63.17
GSMUA_Achr5P12300_001	Banana	cytosol	51.48	63.11
Zm00001d002708_P001	Maize	mitochondrion	64.28	62.86
EES11247	Sorghum	mitochondrion	64.28	62.67
TraesCS2B01G429200.2	Wheat	mitochondrion	62.64	61.57
TraesCS2D01G407800.5	Wheat	plastid	62.85	61.4
TraesCS2A01G410400.3	Wheat	mitochondrion	62.74	60.63
Zm00001d002705_P002	Maize	cytosol, plastid	63.56	59.94
GSMUA_Achr1P00300_001	Banana	cytosol	52.3	58.13
KXG26864	Sorghum	cytosol, plasma membrane, plastid	63.36	57.21
Bra027573.1-P	Field mustard	cytosol	46.37	45.21
Bra025102.1-P	Field mustard	cytosol	45.65	44.73
VIT_02s0025g03630.t01	Wine grape	cytosol	69.91	35.28
Bra002374.1-P	Field mustard	plastid	27.53	30.4
Bra011450.1-P	Field mustard	plastid	27.64	28.72
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	19.34	24.74
Bra011165.1-P	Field mustard	cytosol	18.63	24.01
Bra039194.1-P	Field mustard	plastid	18.01	22.74
Bra011750.1-P	Field mustard	plastid	18.94	22.62
Bra011164.1-P	Field mustard	cytosol, plasma membrane	20.16	22.59
Bra024107.1-P	Field mustard	plasma membrane	19.04	21.06
Bra024449.1-P	Field mustard	cytosol	18.94	15.55
Bra038842.1-P	Field mustard	cytosol	19.04	14.63

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra003110	EnsemblPlants:Bra003110.1	EnsemblPlants:Bra003110.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	UniProt:M4CFX8	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000254390B
SEG:seg	:	:	:	:	:

Description

AT1G63440 (E=0.0) HMA5 | HMA5 (HEAVY METAL ATPASE 5); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism

Coordinates

chrA10:+:5086560..5089807

Molecular Weight (calculated)

106218.0 Da

IEP (calculated)

6.605

GRAVY (calculated)

0.151

Length

977 amino acids

Sequence
(BLAST)

001: MALTSIGEET YSARHPLLQK NKFGGGCRSS SEEEATSKAL FRVVGMTCSA CAGPVEEAIK RLRGIHEAVI DVLNNQAQVL FNPNFVNLEK ICETIQDAGF
101: EASLIENEAN ETSTKVCRIR INGMTCSSCS STIERVLRVT NGVQRAHVSL ALEEAEVHYD RRLVGHDKLL DEIESVGFVA LLISTGEDLS KIDLKIVGEC
201: VDESIKTLLE ALPGVQSVEF HHGTDKIISV LYKHDVTGPR SFIRVFGGTK LKATIFSAGE EGRESQRQVE IKKYYNSFLW SLVCTVPVFL TAMVFMYIPW
301: INHLLMFKVI NMLNAGEIIR CVLATPVQFF IGWRFYYGSY KALRRGSANM DVLVALGTNA AYFYSLYSVT RAATSPGFKG EDFFETSSML ITFILLGKYL
401: EVMAKGKTSD AISKLMKLTP DTAILLTLDN EGKVTGEEEI DGRLIQKNDV IKILPGDKVA SDGYVIWGRS HVDESMMTGE AKLVAKRKGD TVIGGTLNAN
501: GVLHVKVTKV GSESALAQII RLVESAQLAK APAQNLADTI SKFFVPLVIS FSLLTWLVWF FAGKLHWYSE SWIPASMDRF ELALQFGISV MVVACPCALG
601: LATPTAVMVG TGVGASQGVL IKGGQALEKA HMVNCIVFDK TGTLTMGKPV VVKTKMLKNM TLGEFYELVA ATEVNSEHPL AKAIVNHAKE FRDDQENPAW
701: PQARDFLSIT GNGVKATVKG REIMVGNKDL MSQHGVNIPE DAEEMLAEAE ERAQTGILVS VNRELTGVLA VSDPLKPSAR AAISVLKSMN IASIMVTGDN
801: WGTANAIARE VGIDSVMAEA KPKQKAEKVK ELQAAGHVVA MVGDGINDAP ALVAADVGIA IGAGTDIAIE AADIVLMKSN LEDVITAIDL SRKTFSRIRL
901: NYVWALGYNL IGIPIAAGVL FPWTHLRLPP WFAGAAMAAS SVSVVCSSLL LKNYKRPKML DNLEICEVLV ERNLSNN

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.