Factsheet for Bra038842.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51090	Canola	cytosol	85.29	99.63
Bra024449.1-P	Field mustard	cytosol	70.02	74.79
Bra011164.1-P	Field mustard	cytosol, plasma membrane	49.41	72.02
Bra024107.1-P	Field mustard	plasma membrane	49.1	70.67
AT2G19110.2	Thale cress	cytosol	63.89	69.28
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	40.36	67.15
Bra011165.1-P	Field mustard	cytosol	39.5	66.23
VIT_11s0103g00370.t01	Wine grape	plasma membrane	37.37	66.16
KRH02816	Soybean	plasma membrane	35.09	59.63
TraesCS7B01G320900.1	Wheat	plasma membrane	33.44	55.48
GSMUA_Achr5P22660_001	Banana	plasma membrane	33.83	52.63
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	29.66	49.28
KRH19069	Soybean	plasma membrane	41.46	48.08
TraesCS7A01G420000.1	Wheat	plasma membrane	34.93	47.28
TraesCS7D01G412800.1	Wheat	plasma membrane	35.09	47.2
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	34.7	47.17
TraesCS5B01G388000.1	Wheat	plasma membrane	30.61	46.92
HORVU7Hr1G097210.4	Barley	plasma membrane	34.78	46.72
TraesCS5A01G383400.1	Wheat	plasma membrane	29.9	46.57
GSMUA_Achr8P24660_001	Banana	cytosol	34.3	46.33
TraesCS7A01G419500.1	Wheat	plasma membrane	35.25	45.48
TraesCS5D01G392700.1	Wheat	plasma membrane	30.45	45.37
TraesCS7D01G412400.1	Wheat	plasma membrane	35.72	45.26
Os06t0700700-02	Rice	plasma membrane	37.61	44.8
HORVU7Hr1G097240.1	Barley	plasma membrane	35.56	44.8
TraesCS7B01G320100.2	Wheat	plasma membrane	35.96	44.67
EER90320	Sorghum	plasma membrane	36.43	43.31
EER96099	Sorghum	cytosol	29.98	42.57
Zm00001d005190_P001	Maize	plastid	29.82	42.2
Zm00001d014669_P007	Maize	plasma membrane	36.27	41.95
EER96100	Sorghum	cytosol	29.9	40.73
Solyc07g009130.2.1	Tomato	plastid	41.31	40.32
Zm00001d005189_P001	Maize	plasma membrane	30.37	40.04
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	31.08	39.34
Zm00001d019226_P003	Maize	cytosol	22.5	32.03
Bra002374.1-P	Field mustard	plastid	15.03	21.58
Bra011750.1-P	Field mustard	plastid	13.45	20.9
Bra025102.1-P	Field mustard	cytosol	16.21	20.66
Bra039194.1-P	Field mustard	plastid	12.51	20.54
Bra027573.1-P	Field mustard	cytosol	16.13	20.46
Bra011450.1-P	Field mustard	plastid	14.56	19.68
Bra003110.1-P	Field mustard	cytosol	14.63	19.04
Bra027641.1-P	Field mustard	mitochondrion	16.13	17.2

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra038842	EnsemblPlants:Bra038842.1	EnsemblPlants:Bra038842.1-P
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
UniProt:M4FCM3	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0002541082	SEG:seg	:	:	:	:

Description

AT2G19110 (E=0.0) HMA4 | HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter

Coordinates

chrA07:-:1090944..1098500

Molecular Weight (calculated)

136420.0 Da

IEP (calculated)

7.072

GRAVY (calculated)

-0.204

Length

1271 amino acids

Sequence
(BLAST)

0001: MALQNEDNKK EENKKTKKKW QKSYFDVLGI CCPSEVPIIE NILKSLEGIK EYSVIVPTRT VIVVHDSLLI SPSQIAKALN QARLEANVKV DGKTSFKNKW
0101: PSPFAVISGI LLLLSFFKFL YSPFRWLAVA AVAAGIYPIL AKAVASIGRC RVDINILIII TVAATLAMQD YMEAAAVVFL FTIAEWLETR ASYKANAVMQ
0201: SLMSLAPQKA IIAETGEEVE VDDVKVNTIV AVKAGETIPI DGIVVDGNCE VDEKTLTGEA FPVPKQRDST VWAGTINLNG YISVKTTALA SDCVVTKMAK
0301: LVEEAQSSKT KSQRLIDKCS QYYTPAIIFI SGCIAAVPAI MKVHNLNHWF HLALVVLVSA CPCGLILSTP VATFCALTKA ATSGLLIKSA DYLDTLSKIK
0401: ITAFDKTGTI TRGEFIVVDF KSLHGDISLR TLLYWVSSVE SKSSHPMAAT IVDYAKSVDV EPRTEEVEDY QLFPGEGIYG KIDGNDIYIG NKRIASRAKC
0501: STVPEIEVDT KGGKTVGYIY VGERLAGVFN LSDACRSGVI QAMKELKDLG IKTAMLTGDN QDAAMHAQEQ LGNALDVVHG ELLPEDKSRI IQEFKKEGPT
0601: AMVGDGVNDA PALATADIGI SMGISGSALA TQTGDIILMS NDIRRIPQAI KIARRARRKV VQNVFISIIF KVGILILAIC GHPLIWAAVL VDVGTCLLVI
0701: LNSMLLLREK DKSKNKKCYR SSVLNGKKLE GEADEEVDLE AGLLSKSQCN SGCCGDKKTQ EKVVMKKPSS KSSSGHDHAG GCCGDKKTQE EVMMVKPTSK
0801: SSSGYDHAGG CCGDKKTQEK VVMVKPSSKS SSDNGHSGGC CGDKKTQEKV VMVKPSSKSS SDHGRSGGCC GDKKTQEKVM MVKPSGKSRS DHGHSGGCCG
0901: DKKQENVKVV VKDSCCGEKT KKPDGDMGSS ISCKKSTHVH NDLKQKGGSG CCTKDKEKAE KNVEMQILGE GLIDLEKGLQ KKAGETCKTS CCGTKEKAKE
1001: TSSLEKDVLI KETVKQTEEI ALAAEEETGS LDCWLDSSEN KTTVKQSCHE ETSLDIEAGV SCDLKLACCG SIEGGEVKEK LDLEIKSEGQ CKSVCCGDEK
1101: QTGEITLACE EESGCCGNKE EVGQICHQKD CLETDLKLVC CGNTEGEVRE AFDLEKGKGE CCGKEVTQIC SEKPVSKSPC CGTGLKQEGS SSSVNVVESG
1201: SKEREMVKVP SQSCCTSPND LVLQVKKVES CCKVKTPEAC GSKCKASSPS PPPRAPPSPP CGGCLMETVT E

Best Arabidopsis Sequence Match ( AT2G19110.2 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.