Factsheet for Os06t0700700-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 22548273

plasma membrane: 28056797

gfp PMID: 22548273 doi

R Takahashi, Y Ishimaru, H Shimo, Y Ogo, T Senoura, NK Nishizawa, H Nakanishi

Graduate School of Agricultural & Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G320900.1	Wheat	plasma membrane	58.29	81.2
TraesCS7D01G412400.1	Wheat	plasma membrane	72.16	76.77
TraesCS7A01G419500.1	Wheat	plasma membrane	70.2	76.04
HORVU7Hr1G097240.1	Barley	plasma membrane	71.32	75.42
TraesCS7B01G320100.2	Wheat	plasma membrane	72.26	75.37
EER90320	Sorghum	plasma membrane	75.07	74.93
TraesCS7D01G412800.1	Wheat	plasma membrane	65.51	73.97
TraesCS7A01G420000.1	Wheat	plasma membrane	64.85	73.7
HORVU7Hr1G097210.4	Barley	plasma membrane	64.48	72.73
Zm00001d014669_P007	Maize	plasma membrane	73.57	71.43
GSMUA_Achr5P22660_001	Banana	plasma membrane	48.64	63.53
VIT_11s0103g00370.t01	Wine grape	plasma membrane	42.27	62.81
CDY51647	Canola	golgi, plasma membrane, vacuole	19.31	59.54
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	51.45	58.72
GSMUA_Achr8P24660_001	Banana	cytosol	51.73	58.66
CDY69827	Canola	plasma membrane	34.02	57.62
AT4G30120.1	Thale cress	cytosol	29.24	57.56
CDY28160	Canola	cytosol	40.39	56.86
CDX68627	Canola	cytosol, plasma membrane, vacuole	40.21	56.6
Bra011165.1-P	Field mustard	cytosol	40.21	56.6
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	39.92	55.76
KRH02816	Soybean	plasma membrane	38.33	54.68
CDY69511	Canola	plasma membrane	35.99	53.63
Bra011164.1-P	Field mustard	cytosol, plasma membrane	43.49	53.21
CDY62400	Canola	plasma membrane	43.11	52.75
CDY30170	Canola	cytosol, peroxisome, plasma membrane	43.21	52.69
CDY72630	Canola	golgi, plasma membrane, vacuole	17.15	52.59
CDX68625	Canola	plasma membrane	35.33	51.64
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.25	51.46
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.18	50.26
AT4G30110.1	Thale cress	plasma membrane	44.61	50.05
Bra024107.1-P	Field mustard	plasma membrane	41.14	49.72
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	46.3	49.2
KRH37273	Soybean	cytosol, plasma membrane, vacuole	39.74	47.91
CDY28206	Canola	plasma membrane	32.05	47.43
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.52	45.97
KRH19069	Soybean	plasma membrane	46.39	45.16
CDY51090	Canola	cytosol	44.05	43.2
CDY36489	Canola	cytosol	44.89	41.69
AT2G19110.2	Thale cress	cytosol	44.99	40.96
Bra024449.1-P	Field mustard	cytosol	44.61	40.0
Bra038842.1-P	Field mustard	cytosol	44.8	37.61
Solyc07g009130.2.1	Tomato	plastid	45.55	37.33
CDY08717	Canola	cytosol, nucleus, plasma membrane	45.64	31.24
Os08t0486100-01	Rice	cytosol, plasma membrane	5.25	28.0
Os02t0172600-00	Rice	cytosol	20.43	21.78
Os06t0690700-01	Rice	plastid	16.59	21.53
Os06t0665800-01	Rice	cytosol	19.68	20.94
Os03t0178100-00	Rice	plastid	17.43	20.62
Os04t0556000-01	Rice	plastid	19.12	20.36
CDY51648	Canola	cytosol	1.12	17.65

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:4341965
UniProt:A3BF39	EMBL:AB661672	EMBL:AB697186	EMBL:AP005966	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:BAH93709.1	ProteinID:BAS99337.1	ProteinID:EAZ38178.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006812	GO:GO:0008150
GO:GO:0008551	GO:GO:0016020	GO:GO:0016021	GO:GO:0016463	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0046872	GO:GO:0070574	GO:GO:0071577	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	EMBL:HQ646362	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	EnsemblPlantsGene:Os06g0700700	EnsemblPlants:Os06t0700700-02	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0000F1955A	RefSeq:XP_015643659.1	SEG:seg

Description

HEAVY METAL ATPASE 2Similar to P1B-type heavy metal transporting ATPase. (Os06t0700700-01);P-Type heavy metal ATPase, Delivery of Zinc to developing tissues (Os06t0700700-02)

Coordinates

chr6:-:29473630..29480485

Molecular Weight (calculated)

115979.0 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.237

Length

1067 amino acids

Sequence
(BLAST)

0001: MAAEGGRCQK SYFDVLGICC PSEVPLVEKL LQPLEGVQKV TVIVPSRTVI VVHDVDAISQ SQIVKALNQA RLEASVRAYG NGSEKITNKW PSPYVLLCGL
0101: LLVVSLFEHF WHPLKWFALV AAAAGLPPIV LRSIAAIRRL TLDVNILMLI AVAGAIALKD YSEAGFIVFL FTTAEWLETR ASHKATAGMS ALMSMAPQKA
0201: ILAETGEVVA ARDVKVNTVI AVKAGEVIPI DGVVVDGRSE VDESTLTGES FPVSKQPDSQ VWAGTLNIDG YIAVRTTAMA DNSAVAKMAR LVEEAQNSRS
0301: STQRLIDTCA KYYTPAVVVM AGSVAAIPAI AKAHNLKHWF QLALVLLVSA CPCALVLSTP IATFCALLRA ARTGLLIKGG DVLESLASIK VAAFDKTGTI
0401: TRGEFSVEEF QPVGERVSLQ QLLYWVSSVE SRSSHPMASV LVDYAQSKSV EPKSENVSEF QIYPGEGIYG EIDGAGIYIG NKRILSRASC ETVPDMKDMK
0501: GVTIGYVACN NELIGVFTLS DACRTGSAEA IKELRSLGIK SVMLTGDSSA AATYAQNQLG NILAEVHAEL LPEDKVRIVG ELKEKDGPTL MVGDGMNDAP
0601: ALAKADVGVS MGVSGSAVAM ETSHVALMSN DIRRIPKAVR LARRTHRTII VNIIFSVITK LAIVGLAFAG HPLIWAAVLA DVGTCLLVIM YSMLLLREKD
0701: SRKAKKCAAS HHGSPKKCCS SSHHGSHAKK NHGVSHHCSD GPCKSMVSCK ESSVAKNACH DHHHEHNHHE EPAHKHSSNQ HGCHDHSHGH SNCKEPSNQL
0801: ITNKHACHDG HNHCADTSNL HDTKKHDCHG HEHSTCKEEL NALPPTNDHA CHGHEHSHCE EPVALHSTGE HACHEHEHEH IHCDEPIGSH CADKHACHDH
0901: EQVHEHHCCD EQQTPHTADL HPCHDHDHDN LEVEEVKDCH AEPPHHHNHC CHEPHDQVKN DTHPVQEHSI SIEESSDHHE HHHNEEHKAE DCGHHPKPKD
1001: CAPPPTDCIS RNCCSNTSKG KDICSSLHRD HHTSQASRCC RSYVKCSRPS RSCCSHSIVK LPEIVVE

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.