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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plasma membrane 3
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Os08t0205400-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G44790.1 Os08t0205400-01 AT1G66240.1 17223078
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G382300.1 Wheat cytosol 89.43 89.61
TraesCS7D01G467100.1 Wheat cytosol 88.73 88.91
TraesCS7A01G480100.1 Wheat cytosol 88.63 88.81
KXG20553 Sorghum plasma membrane 88.53 88.18
Os02t0172600-00 Rice cytosol 83.95 84.12
HORVU7Hr1G108890.1 Barley cytosol, mitochondrion 84.95 83.28
Zm00001d011553_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 14.96 81.97
Zm00001d046953_P002 Maize cytosol, endoplasmic reticulum, plasma membrane 83.35 80.85
Zm00001d027860_P001 Maize plasma membrane 13.46 80.36
GSMUA_Achr8P06970_001 Banana cytosol 73.68 78.28
GSMUA_Achr5P26800_001 Banana cytosol 72.78 77.99
CDY67984 Canola cytosol, peroxisome, plasma membrane 17.65 72.24
VIT_01s0011g01360.t01 Wine grape cytosol 70.89 71.1
KRH37212 Soybean cytosol 68.59 69.78
KRH58516 Soybean cytosol 68.59 69.22
KRH12191 Soybean cytosol 68.69 69.18
KRH42397 Soybean cytosol 68.0 68.61
Solyc02g068490.2.1 Tomato cytosol 68.2 68.2
PGSC0003DMT400024409 Potato cytosol 67.9 67.96
CDY50771 Canola cytosol 66.9 67.5
AT5G44790.1 Thale cress cytosol 67.3 67.43
CDY39400 Canola cytosol 66.9 67.17
Bra025102.1-P Field mustard cytosol 66.3 66.7
Bra027573.1-P Field mustard cytosol 65.0 65.07
CDY26408 Canola golgi, nucleus, plasma membrane 10.87 63.01
CDY69037 Canola cytosol 34.99 60.1
CDY67659 Canola cytosol 35.09 59.16
Os04t0556000-01 Rice plastid 46.76 46.81
Os08t0486100-01 Rice cytosol, plasma membrane 7.88 39.5
Os03t0178100-00 Rice plastid 25.62 28.49
Os07t0232900-01 Rice cytosol, nucleus, plasma membrane 22.03 22.01
Os06t0690700-01 Rice plastid 17.55 21.41
Os06t0700700-02 Rice plasma membrane 20.94 19.68
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000EntrezGene:4341778
UniProt:A0A0P0X004EMBL:AK241795InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
ProteinID:BAD45393.1ProteinID:BAF20219.2ProteinID:BAS99032.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0006811GO:GO:0006812GO:GO:0008150GO:GO:0009636GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872GO:GO:0099132
InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_Cu_ion-bdInterPro:HMA_domInterPro:HMA_dom_sfInterPro:Heavy-metal-associated_CS
InterPro:IPR006121InterPro:IPR023214InterPro:IPR023299EnsemblPlantsGene:Os06g0665800EnsemblPlants:Os06t0665800-01InterPro:P-typ_ATPase_IB
PFAM:PF00122PFAM:PF00403PFAM:PF00702PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154
ScanProsite:PS01047PFscan:PS50846PANTHER:PTHR43520PANTHER:PTHR43520:SF14InterPro:P_typ_ATPaseSUPFAM:SSF55008
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR00003TIGRFAMs:TIGR01494TIGRFAMs:TIGR01525
TMHMM:TMhelixUniParc:UPI0001C7CA75RefSeq:XP_015643579.1SEG:seg::
Description
HEAVY METAL ATPASE 9Similar to heavy metal ATPase. (Os06t0665800-01);P-type heavy-metal ATPase, Metal efflux transport (Os06t0665800-02)
Coordinates
chr6:-:27517100..27523604
Molecular Weight (calculated)
107365.0 Da
IEP (calculated)
5.636
GRAVY (calculated)
0.320
Length
1003 amino acids
Sequence
(BLAST)
0001: MAHLQLSAVA GGGRPAAAGG GGDEMEDVRL LDSYDEEMGG GAAAAAAGEE EEAHVRVTGM TCSACTSAVE GAVSARRGVR RVAVSLLQNR AHVVFDPALL
0101: KVEDIIEAIE DAGFDAEIIP DTAISQPKAQ KTLSAQFRIG GMTCANCVNS VEGILKRLSG VKGAVVALAT SLGEVEYDPS VINKDEIVEA IEDAGFEAAF
0201: LQSSEQDKIL LGLTGLHTER DVNVLHDILK KMIGLRQFDV NATVSEVEII FDPEAVGLRS IVDAIETGSN GRLKAHVQNP YARGASNDAH EAAKMLHLLR
0301: SSLFLSIPVF FIRMVCPHIP FIRSILMMHC GPFHMGDLLK WILVSIVQFV VGKRFYIAAY RALRHGSTNM DVLVVLGTTA SYVYSVCALL YGAFTGFHPP
0401: IYFETSAMII TFVLFGKYLE VLAKGKTSDA IKKLVELVPA TALLLLKDKE GKYTEEREID ALLVQPGDIL KVLPGSKVPA DGVVVWGTSH VNESMITGES
0501: APIPKEVSSA VIGGTMNLHG VLHIQANKVG SETVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPIVITL SMITFLVWFL CGWVGAYPNS WISGTSNCFV
0601: FSLMFAIAVV VIACPCALGL ATPTAVMVAT GVGANHGVLV KGGDALERAQ NVNYVIFDKT GTLTQGKAVV TTAKVFSGMD LGDFLTLVAS AEASSEHPLA
0701: KAIVEYAFHF HFFGKLPTSK DGIEQRKEDR LSQLLLQVED FSALPGKGVQ CLINGKRVLV GNRTLVTENG VNVPPEAENF LVDLELNAKT GILVSYDDDF
0801: VGLMGITDPL KREAAVVVEG LKKMGVHPVM LTGDNWRTAK AVAKEVGIED VRAEVMPAGK ADVVRSLQKD GSIVAMVGDG INDSPALAAA DVGMAIGGGT
0901: DIAIEAADYV LVRNNLEDVI TAIDLSRKTF SRIRWNYFFA MAYNVVAIPV AAGALFPFTR LQMPPWLAGA CMAFSSVSVV CSSLLLRRYR KPRLTTVLQI
1001: TVE
Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
Arabidopsis Description
RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.