Factsheet for Bra025102.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003234.1-P
Bra007230.1-P
Bra014702.1-P
Bra029854.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	Bra029854.1-P	AT1G66240.1	17223078
AT5G44790.1	Bra003234.1-P	AT3G56240.1	17223078
AT5G44790.1	Bra007230.1-P	AT3G56240.1	17223078
AT5G44790.1	Bra014702.1-P	AT3G56240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39400	Canola	cytosol	99.5	99.3
AT5G44790.1	Thale cress	cytosol	92.18	91.81
Bra027573.1-P	Field mustard	cytosol	88.47	88.02
VIT_01s0011g01360.t01	Wine grape	cytosol	77.33	77.1
KRH58516	Soybean	cytosol	75.53	75.75
KRH12191	Soybean	cytosol	75.33	75.4
KRH42397	Soybean	cytosol	74.82	75.05
KRH37212	Soybean	cytosol	74.02	74.85
Solyc02g068490.2.1	Tomato	cytosol	74.12	73.68
PGSC0003DMT400024409	Potato	cytosol	73.92	73.55
GSMUA_Achr8P06970_001	Banana	cytosol	65.4	69.07
GSMUA_Achr5P26800_001	Banana	cytosol	63.69	67.84
EES06348	Sorghum	cytosol	67.8	67.8
TraesCS6D01G146500.1	Wheat	cytosol	67.4	67.33
TraesCS6A01G156900.1	Wheat	cytosol	67.3	67.3
Os02t0172600-00	Rice	cytosol	67.3	67.03
Zm00001d053783_P001	Maize	plasma membrane	67.0	66.93
TraesCS7A01G480100.1	Wheat	cytosol	66.9	66.63
TraesCS6B01G184800.1	Wheat	cytosol	64.89	66.56
KXG20553	Sorghum	plasma membrane	67.0	66.34
Os06t0665800-01	Rice	cytosol	66.7	66.3
TraesCS7D01G467100.1	Wheat	cytosol	66.5	66.23
TraesCS7B01G382300.1	Wheat	cytosol	66.4	66.13
Zm00001d027860_P001	Maize	plasma membrane	10.93	64.88
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	11.53	62.84
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	64.29	62.66
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	61.99	59.77
HORVU6Hr1G031960.1	Barley	plastid	29.69	51.57
Bra003110.1-P	Field mustard	cytosol	44.73	45.65
Bra027641.1-P	Field mustard	mitochondrion	45.24	37.84
Bra002374.1-P	Field mustard	plastid	27.88	31.41
Bra011450.1-P	Field mustard	plastid	27.28	28.94
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	21.16	27.62
Bra011165.1-P	Field mustard	cytosol	20.76	27.31
Bra011164.1-P	Field mustard	cytosol, plasma membrane	21.26	24.31
Bra024107.1-P	Field mustard	plasma membrane	20.26	22.88
Bra039194.1-P	Field mustard	plastid	16.65	21.45
Bra011750.1-P	Field mustard	plastid	17.35	21.15
Bra024449.1-P	Field mustard	cytosol	20.06	16.81
Bra038842.1-P	Field mustard	cytosol	20.66	16.21

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra025102	EnsemblPlants:Bra025102.1	EnsemblPlants:Bra025102.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	UniProt:M4E8J6	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000253F5CB
SEG:seg	:	:	:	:	:

Description

AT5G44790 (E=0.0) RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter

Coordinates

chrA06:+:25165061..25168789

Molecular Weight (calculated)

106612.0 Da

IEP (calculated)

4.801

GRAVY (calculated)

0.256

Length

997 amino acids

Sequence
(BLAST)

001: MAPSRRDLQL TPLSGDTAAE IGAMEEVRLL DSYDDNDDSL SKIEEGSGGS GLRKIQVGIT GMTCAACSNS VEGALMSVNG VFKASVALLQ NRADVLFDPN
101: LVKEDDIKEA IEDAGFEAEI LAEPVTSGTK TQATLVGQFT IGGMTCAACV NSVEGILRDL PGVKRAVVAL ATSLGEVEYD PNVISKDDIV TAIEDAGFEG
201: SLVQSNQQDK LLLRVDGVLN ELDAQVLEGI LTRLNGVRQF RLDRITGELE VVFDPEVVSS RSLVDGIEGE GYGKFKLRVM SPYERLTSKD TGEASNMFRR
301: FISSLSLSIP LFFIQVICPH IALFDTVLVW RCGPFMVGDW LKWALVSVIQ FVIGKRFYVA AWRALRNGST NMDVLVALGT SASYFYSVGA LLYGAVTGFW
401: SPTYFDASAM LITFVLLGKY LESLAKGKTS DAMKKLVQLT PATAILIEGK GEREIDALLI HPGDSLKVLP GGKIPADGVV VWGSSYVNES MVTGESVPVS
501: KEVDSPVIGG TINMHGVLHI KATKVGSDAV LSQIISLVET AQMSKAPIQK FADYVASIFV PVVITLALFT LVGWSIGGAV GAYPDEWLPQ NGTHFVFSLM
601: FSISVVVIAC PCALGLATPT AVIVATRVGA TNGVLIRGGD ALEKAHKVKY VISDKTGTLT QGKATVTTAK VFSEMDRGEF LTLVASAEAS SEHPLAKAIV
701: EYARHFHFFD ESAEDGDTSN KVSQNAGWLL DTSDFSALPG KGIQCLVDNK LILVGNRKLM SENSITIPDH VEKFVEELEE SAKTGVIVAY SGQLVGVMGV
801: ADPLKREAAV VVEGLLRMGV RPIMVTGDNW RTARAVAKEV GIEDVRAEVM PAGKAEVIRS LQKDGSTVAM VGDGINDSPA LAAADVGMAI GAGTDVAIEA
901: ADYVLMRNNL EDVITAIDLS RKTLTRIRLN YVFAMAYNVV SIPIAAGVFF PVLRVQLPPW AAGACMALSS VSVVCSSLLL RRYKKPRLTT ILEITKE

Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)

0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E

Arabidopsis Description

RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.