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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
PPI

Inferred distinct locusB in Crop

locusBlocations
EES17440

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G44790.1 EES17440 AT1G66240.1 17223078
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053783_P001 Maize plasma membrane 96.09 95.99
Os02t0172600-00 Rice cytosol 87.76 87.41
TraesCS6D01G146500.1 Wheat cytosol 86.96 86.87
TraesCS6A01G156900.1 Wheat cytosol 86.56 86.56
TraesCS6B01G184800.1 Wheat cytosol 84.15 86.32
KXG20553 Sorghum plasma membrane 85.06 84.21
GSMUA_Achr8P06970_001 Banana cytosol 74.82 79.03
GSMUA_Achr5P26800_001 Banana cytosol 73.42 78.21
CDY67984 Canola cytosol, peroxisome, plasma membrane 17.55 71.43
KRH37212 Soybean cytosol 69.81 70.59
VIT_01s0011g01360.t01 Wine grape cytosol 70.71 70.5
HORVU6Hr1G031960.1 Barley plastid 40.52 70.38
KRH12191 Soybean cytosol 70.01 70.08
KRH58516 Soybean cytosol 69.41 69.62
KRH42397 Soybean cytosol 69.21 69.42
Solyc02g068490.2.1 Tomato cytosol 68.91 68.49
PGSC0003DMT400024409 Potato cytosol 68.81 68.46
CDY50771 Canola cytosol 68.2 68.41
AT5G44790.1 Thale cress cytosol 68.51 68.23
CDY39400 Canola cytosol 68.2 68.07
Bra025102.1-P Field mustard cytosol 67.8 67.8
CDY26408 Canola golgi, nucleus, plasma membrane 11.74 67.63
Bra027573.1-P Field mustard cytosol 66.0 65.67
CDY69037 Canola cytosol 35.81 61.13
CDY67659 Canola cytosol 35.91 60.17
EES11247 Sorghum mitochondrion 47.54 47.31
EES04697 Sorghum cytosol, plastid 45.74 46.82
KXG26864 Sorghum cytosol, plasma membrane, plastid 46.74 43.07
OQU81022 Sorghum cytosol 27.08 34.31
KXG40056 Sorghum plastid 25.18 27.89
EER96099 Sorghum cytosol 21.26 23.69
EER96100 Sorghum cytosol 21.97 23.47
KXG20697 Sorghum plastid 17.95 21.62
EER90320 Sorghum plasma membrane 21.06 19.64
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfUniProt:C5XW52EnsemblPlants:EES06348ProteinID:EES06348
ProteinID:EES06348.2GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005507GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872GO:GO:0099132
InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_Cu_ion-bdInterPro:HMA_domInterPro:HMA_dom_sfInterPro:Heavy-metal-associated_CS
InterPro:IPR006121InterPro:IPR023214InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00403
PFAM:PF00702PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154ScanProsite:PS01047PFscan:PS50846
PANTHER:PTHR43520PANTHER:PTHR43520:SF14InterPro:P_typ_ATPaseEnsemblPlantsGene:SORBI_3004G057400SUPFAM:SSF55008SUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR00003TIGRFAMs:TIGR01494TIGRFAMs:TIGR01525TMHMM:TMhelix
UniParc:UPI0003C71517SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:4590758..4595694
Molecular Weight (calculated)
107156.0 Da
IEP (calculated)
5.568
GRAVY (calculated)
0.309
Length
997 amino acids
Sequence
(BLAST)
001: MAHLQLTALA GGADDEMEEV ALLGSYDEEA GVGPEGEDQA EAGMRRVQVR VTGMTCSACT GAVEAALSAR RGVRRAAVSL LQNRAHVVFD PALAKDDDIV
101: EAIEDAGFEA EILPDSTVSQ PKSQKTLSGQ FRIGGMTCAA CVNSVEGILK KLPGVKRAVV ALATSLGEVE YDPSAISKDE IVQAIEDAGF DAALLQSSEQ
201: DKALLTVTGL HFEGDVDVLH DILKKMEGLR QFGVDFAKSE VDIVFDPEVV GLRQIVDTIE MESNNRLKAH VQNPYIRAAS NDAQEANKTL HLLRFSLFLS
301: IPVFFIRMVC PHIPLISSFL LMHFGPFRIG DLLKWILVTM VQFVVGKRFY VAAYRALRHG STNMDVLVVI GTTASYVYSV CALLYGAFTG FHPPIYFETS
401: AMIITFVLFG KYLEVLAKGK TSDAIKKLVE LAPATALLLL KDKEGKYSGE KEIDASLVQP GDALKVLPGS KVPADGIVIW GTSHVNESMV TGESVPISKE
501: VSSLVIGGTM NLHGILHIQA TKVGSGTVLS QIISLVETAQ MSKAPIQKFA DYVASIFVPI VITLSFLTFL AWFLCGWLGA YPNSWSAESS NCFVFSLMFS
601: ISVVVIACPC ALGLATPTAV MVATGVGASH GVLVKGGDAL ERAQNVKYVI FDKTGTLTQG KATVTTAKIF SGMDLGDFLT LVASAEASSE HPLAKAILDY
701: TFHFHFFGKL TSAKDNINRR KEEILSQWLL EVADFSALPG KGIQCWINGK KILVGNRALI TENGVNIPEE AECFLVDMEL NAKTGILVAY DGDFIGLIGI
801: TDPLKREAAV VIQGLKKMGV HPVMVTGDNW RTARAVAKEV GIDDVRAEVM PAGKANVIRS LQKDGSVVAM VGDGINDSPA LAAADVGMAI GAGTDIAIEA
901: ADYVLVRNNL EDVITAIDLS RKTFSRIRWN YFFAMAYNVI AIPVAAGALF PFTGVQMPPW LAGACMAFSS VSVVCSSLLL RRYRKPRLTT VLQITVE
Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
Arabidopsis Description
RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.