CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014569_P002	Maize	plastid	95.41	95.99
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	42.75	88.06
TraesCS7A01G439100.1	Wheat	plastid	88.04	88.04
Os06t0690700-01	Rice	plastid	87.32	87.96
TraesCS7D01G428700.1	Wheat	plastid	87.68	87.89
HORVU7Hr1G100160.2	Barley	plastid	87.44	83.12
CDY67922	Canola	cytosol	20.05	69.75
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.89	68.86
GSMUA_Achr9P16140_001	Banana	plastid	70.77	68.06
VIT_07s0129g01040.t01	Wine grape	plastid	64.49	64.42
CDX75636	Canola	mitochondrion	62.56	63.4
Bra011750.1-P	Field mustard	plastid	62.44	63.2
CDX69288	Canola	plastid	62.32	63.0
AT4G37270.1	Thale cress	plasma membrane, plastid	62.08	62.76
KRH04519	Soybean	plastid	61.59	62.42
KRH57989	Soybean	plasma membrane, plastid	61.96	61.66
Bra039194.1-P	Field mustard	plastid	57.37	61.37
PGSC0003DMT400064232	Potato	plastid	60.51	61.32
Solyc02g092920.2.1	Tomato	plastid	60.75	61.27
CDY46080	Canola	plastid	48.55	59.56
OQU81022	Sorghum	cytosol	21.98	23.13
EER96099	Sorghum	cytosol	23.91	22.12
EER96100	Sorghum	cytosol	22.71	20.15
EES04697	Sorghum	cytosol, plastid	22.71	19.3
KXG40056	Sorghum	plastid	20.17	18.56
EES11247	Sorghum	mitochondrion	22.34	18.46
EES06348	Sorghum	cytosol	21.62	17.95
KXG20553	Sorghum	plasma membrane	21.74	17.87
KXG26864	Sorghum	cytosol, plasma membrane, plastid	21.86	16.73
EER90320	Sorghum	plasma membrane	21.01	16.28

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A194YL74	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006812	GO:GO:0006878	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009642	GO:GO:0009941	GO:GO:0009987	GO:GO:0015633	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0019725	GO:GO:0019829	GO:GO:0055069
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KXG20697
ProteinID:KXG20697	ProteinID:KXG20697.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119
ScanProsite:PS00154	PANTHER:PTHR43079	InterPro:P_typ_ATPase	EnsemblPlantsGene:SORBI_3010G240500	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0001C805E1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:58226427..58238798

Molecular Weight (calculated)

87952.4 Da

IEP (calculated)

7.285

GRAVY (calculated)

0.185

Length

828 amino acids

Sequence
(BLAST)

001: MQFLSASASV SVSSPVPPSA HLLRLSRPPP FPHLRRRCSP PKPLALTPRP PLLLASRPSL LFTPRAHGGH GHGHGHHHHH GHDHHHHHHG HGHGHHEVDV
101: HGGGGGAAVM RVARAIGWAS VADALREHLQ ACCISLGLLL IAAACPHVAL LNSVGRLQAA LIAVAFPLVG VSAALDALVN IADGRINIHV LMALAAFASI
201: FMGNALEGGL LLAMFNLAHI AEEYFTSKSM FDVRELKENH PEFALLLETS GEESVQFSNL SYTKVPVHDL EVGSHILVRA GEAVPVDGEV YQGSSTVTIE
301: HLTGETKPLE RTVGDAIPGG ARNLEGMMIV KVTKSWEDST LNRIVQLTEE GQLNKPKLQR WLDEFGEYYS RVVVALSLGV ALLGPLLFKW PFFGNSVCRG
401: SIYRGLGLMV AASPCALAVA PLAYATAISS LASKGILLKG GHVLDALSSC QSIAFDKTGT LTTGKLMCKA IEPIHGHLGV KNGHSNPSCC TPNCESEALA
501: VAAAMEKGTT HPIGRAVVDH SVGKDLPVVA VESFECLPGR GVVATLTGVK VRENENELSE ASIGSVDYIS SLYRSNGESE QIRAAAKSSA YGPEFVQAAL
601: SVDKKVTLFH FEDEPRSGVC EVISTLREKA KLHIMMLTGD HESSAHRVAK AVCIEEVHFS LKPEDKLNKV KAVSREGGGG LIMVGDGIND APALAAATVG
701: MVLAQRASAT AVAVADVLLL QDNICGVPFC IAKARQTTSL VKQSVALALT CIVFAALPSV LGFLPLWLTV LLHEGGTLLV CLNSIRALNA PTWSLVDDIR
801: QLVDSLRNYF SSKFNSSSSN YVANTVTL

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.