CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75636	Canola	mitochondrion	98.53	98.78
Bra011750.1-P	Field mustard	plastid	98.05	98.17
AT4G37270.1	Thale cress	plasma membrane, plastid	93.04	93.04
CDY67922	Canola	cytosol	24.66	84.87
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	16.61	81.44
CDY46080	Canola	plastid	66.18	80.3
KRH57989	Soybean	plasma membrane, plastid	71.92	70.79
KRH04519	Soybean	plastid	70.57	70.75
VIT_07s0129g01040.t01	Wine grape	plastid	68.25	67.43
TraesCS7B01G337700.1	Wheat	extracellular, plasma membrane	32.6	66.42
PGSC0003DMT400064232	Potato	plastid	64.71	64.87
Solyc02g092920.2.1	Tomato	plastid	64.71	64.56
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	53.6	63.62
Os06t0690700-01	Rice	plastid	63.61	63.38
Zm00001d014569_P002	Maize	plastid	62.76	62.45
KXG20697	Sorghum	plastid	63.0	62.32
TraesCS7D01G428700.1	Wheat	plastid	62.64	62.11
TraesCS7A01G439100.1	Wheat	plastid	62.64	61.96
GSMUA_Achr9P16140_001	Banana	plastid	62.88	59.81
HORVU7Hr1G100160.2	Barley	plastid	62.15	58.44
CDY51647	Canola	golgi, plasma membrane, vacuole	11.84	28.03
CDY26408	Canola	golgi, nucleus, plasma membrane	5.74	27.17
CDY67984	Canola	cytosol, peroxisome, plasma membrane	7.94	26.53
CDY69827	Canola	plasma membrane	19.05	24.76
CDY69511	Canola	plasma membrane	19.9	22.77
CDX68627	Canola	cytosol, plasma membrane, vacuole	20.76	22.43
CDY28160	Canola	cytosol	20.63	22.3
CDX68625	Canola	plasma membrane	19.78	22.19
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	14.29	21.43
CDX91834	Canola	cytosol, peroxisome, plasma membrane	21.37	20.4
CDY62400	Canola	plasma membrane	21.49	20.18
CDY30170	Canola	cytosol, peroxisome, plasma membrane	21.49	20.11
CDY16605	Canola	plastid	21.37	19.77
CDX92394	Canola	plastid	21.37	19.77
CDX68986	Canola	plastid	22.1	19.34
CDX75363	Canola	plastid	22.1	19.32
CDY49160	Canola	cytosol	22.83	19.22
CDY50396	Canola	cytosol	22.71	19.12
CDX93870	Canola	endoplasmic reticulum, plasma membrane	16.85	18.9
CDY28206	Canola	plasma membrane	16.36	18.59
CDY25498	Canola	mitochondrion	22.83	18.09
CDY34353	Canola	mitochondrion	22.47	17.83
CDY50771	Canola	cytosol	21.61	17.81
CDY39400	Canola	cytosol	21.49	17.62
CDY72630	Canola	golgi, plasma membrane, vacuole	6.84	16.09
CDY51090	Canola	cytosol	20.76	15.62
CDY36489	Canola	cytosol	20.63	14.71
CDY69037	Canola	cytosol	8.55	11.99
CDY67659	Canola	cytosol	8.42	11.6
CDY08717	Canola	cytosol, nucleus, plasma membrane	20.63	10.84
CDY51646	Canola	cytosol, plasma membrane, vacuole	2.32	9.74
CDY51690	Canola	cytosol, plasma membrane, vacuole	1.83	8.77
CDY51648	Canola	cytosol	0.24	2.94

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078C2J0	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDX69288	ProteinID:CDX69288	ProteinID:CDX69288.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	EnsemblPlantsGene:GSBRNA2T00131112001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR43079
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0004EE0AF5	SEG:seg	:	:	:

Description

BnaC01g01650D

Coordinates

chrLK031789:-:3947541..3951866

Molecular Weight (calculated)

87823.1 Da

IEP (calculated)

7.859

GRAVY (calculated)

0.138

Length

819 amino acids

Sequence
(BLAST)

001: MEPAALTRSS SSSLTRFPYR RGLATLRLAR VNSFSILPPK TPLPLRISAS LSLPRQSIRL RAVEDRNHDH HDHDGEKEHH HHHHHHHGCC SVELKAESKP
101: QKALFGFAKA IGWVRLANFL REHLHLCCSS AALFVAAAAC PFFAPKPYVK SLQHAFMIVG FPLVGVSASL DALMDIAGGK VNIHVLMALA AFASVFMGNA
201: LEGGLLLAMF NLAHIAEEFF TSRSMVDVKE LKESNPDSAL LIEVKNGNVP NISDLSYKSV PVHSVEVGSY ILVGTGEIVP VDCEVYQGSA TITVEHLTGE
301: VKPLEAKAGD RVPGGARNLD GRMIVKATKA WNESTLNRIV QLTEEAHSNK PKLQRWLDEF GENYSKVVVV LSLAIAFLGP FLFKWPFLST TACRGSVYRA
401: LGLMVAASPC ALAVAPLAYA TAISSCAKKG ILLKGAQVLD ALASCHTVAF DKTGTLTTGG LTCKAIEPIY GHHGGNNPSV ITCCVPNCEK EALAVAAAME
501: KGTTHPIGRA VVDHSVGKDL PSIFVESFEY FPGRGLTATV NGAESVAEES RLRKASLGSI EFITSLFKSE DESKQIKDAV NASLYGKDFV HAALSVDHKV
601: TLIHLEDQPR PGVSGVIAEL KSWAQLRVMM LTGDHDSSAW RVANAVGISE VYCNLKPEDK LNHVKNIARD AGGGLIMVGE GINDAPALAA ATVGIVLAQR
701: ASATAIAVAD ILLLRDNITG VPFCVAKSRQ TTSLIKQNVA LALTSIFLAA LPSVLGFLPL WLTVLLHEGG TLLVCLNSVR GLNDPSWSWK QDIAHLINKL
801: SSRESTSSNN SLSSVETAH

Best Arabidopsis Sequence Match ( AT4G37270.1 )
(BLAST)

001: MEPATLTRSS SLTRFPYRRG LSTLRLARVN SFSILPPKTL LRQKPLRISA SLNLPPRSIR LRAVEDHHHD HHHDDEQDHH NHHHHHHQHG CCSVELKAES
101: KPQKMLFGFA KAIGWVRLAN YLREHLHLCC SAAAMFLAAA VCPYLAPEPY IKSLQNAFMI VGFPLVGVSA SLDALMDIAG GKVNIHVLMA LAAFASVFMG
201: NALEGGLLLA MFNLAHIAEE FFTSRSMVDV KELKESNPDS ALLIEVHNGN VPNISDLSYK SVPVHSVEVG SYVLVGTGEI VPVDCEVYQG SATITIEHLT
301: GEVKPLEAKA GDRVPGGARN LDGRMIVKAT KAWNDSTLNK IVQLTEEAHS NKPKLQRWLD EFGENYSKVV VVLSLAIAFL GPFLFKWPFL STAACRGSVY
401: RALGLMVAAS PCALAVAPLA YATAISSCAR KGILLKGAQV LDALASCHTI AFDKTGTLTT GGLTCKAIEP IYGHQGGTNS SVITCCIPNC EKEALAVAAA
501: MEKGTTHPIG RAVVDHSVGK DLPSIFVESF EYFPGRGLTA TVNGVKTVAE ESRLRKASLG SIEFITSLFK SEDESKQIKD AVNASSYGKD FVHAALSVDQ
601: KVTLIHLEDQ PRPGVSGVIA ELKSWARLRV MMLTGDHDSS AWRVANAVGI TEVYCNLKPE DKLNHVKNIA REAGGGLIMV GEGINDAPAL AAATVGIVLA
701: QRASATAIAV ADILLLRDNI TGVPFCVAKS RQTTSLVKQN VALALTSIFL AALPSVLGFV PLWLTVLLHE GGTLLVCLNS VRGLNDPSWS WKQDIVHLIN
801: KLRSQEPTSS SSNSLSSAH

Arabidopsis Description

HMA1Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M3H5]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.