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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plastid
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75363 Canola plastid 97.76 97.65
Bra011450.1-P Field mustard plastid 97.44 97.02
AT4G33520.2 Thale cress plastid 90.6 89.36
VIT_12s0142g00400.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 22.76 77.74
KRH58274 Soybean plasma membrane 54.59 69.34
Solyc01g105160.2.1 Tomato plastid 53.74 69.28
VIT_12s0142g00330.t01 Wine grape golgi, plasma membrane 32.05 67.72
GSMUA_Achr7P12640_001 Banana cytosol 59.51 66.71
OQU81022 Sorghum cytosol 55.77 66.33
TraesCS7A01G239700.1 Wheat cytosol 55.98 65.26
Os08t0486100-01 Rice cytosol, plasma membrane 13.89 65.0
KRH42155 Soybean plastid 64.96 64.89
HORVU7Hr1G048770.2 Barley endoplasmic reticulum, plasma membrane 19.87 58.86
TraesCS7D01G237500.1 Wheat plastid 59.62 58.61
TraesCS7B01G135300.1 Wheat plastid 59.51 58.51
Zm00001d052801_P004 Maize plastid 60.36 58.37
CDY16605 Canola plastid 39.0 41.24
CDX92394 Canola plastid 38.89 41.13
CDY26408 Canola golgi, nucleus, plasma membrane 6.94 37.57
CDY67984 Canola cytosol, peroxisome, plasma membrane 9.62 36.73
CDX91834 Canola cytosol, peroxisome, plasma membrane 28.21 30.77
CDY67923 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 5.24 29.34
CDY49160 Canola cytosol 29.06 27.95
CDY50771 Canola cytosol 29.49 27.77
CDY50396 Canola cytosol 28.74 27.65
CDY39400 Canola cytosol 29.27 27.43
CDY67922 Canola cytosol 6.84 26.89
CDY34353 Canola mitochondrion 29.38 26.65
CDY25498 Canola mitochondrion 29.06 26.31
CDY51647 Canola golgi, plasma membrane, vacuole 9.62 26.01
CDY69827 Canola plasma membrane 17.31 25.71
CDX93870 Canola endoplasmic reticulum, plasma membrane 19.98 25.62
CDY28160 Canola cytosol 18.38 22.69
CDY69511 Canola plasma membrane 17.31 22.63
CDX68627 Canola cytosol, plasma membrane, vacuole 18.27 22.56
CDX75636 Canola mitochondrion 19.34 22.15
CDX69288 Canola plastid 19.34 22.1
CDX68625 Canola plasma membrane 16.99 21.78
CDY72630 Canola golgi, plasma membrane, vacuole 8.01 21.55
CDY30170 Canola cytosol, peroxisome, plasma membrane 20.09 21.49
CDY46080 Canola plastid 15.38 21.33
CDY62400 Canola plasma membrane 19.77 21.22
CDY69037 Canola cytosol 12.71 20.38
CDY67659 Canola cytosol 12.61 19.83
CDX68623 Canola cytosol, endoplasmic reticulum, plasma membrane 11.43 19.6
CDY28206 Canola plasma membrane 14.53 18.86
CDY51090 Canola cytosol 19.77 17.0
CDY36489 Canola cytosol 20.41 16.62
CDY51690 Canola cytosol, plasma membrane, vacuole 2.99 16.37
CDY51646 Canola cytosol, plasma membrane, vacuole 3.21 15.38
CDY08717 Canola cytosol, nucleus, plasma membrane 20.09 12.06
CDY51648 Canola cytosol 0.32 4.41
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078BW01
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDX68986ProteinID:CDX68986
ProteinID:CDX68986.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00130735001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sfInterPro:Heavy-metal-associated_CSInterPro:IPR006121InterPro:IPR023214
InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00403PFAM:PF00702PRINTS:PR00119
ScanProsite:PS00154ScanProsite:PS01047PFscan:PS50846PANTHER:PTHR43520PANTHER:PTHR43520:SF8InterPro:P_typ_ATPase
SUPFAM:SSF55008SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01511
TIGRFAMs:TIGR01525TMHMM:TMhelixUniParc:UPI0004EBBCAFSEG:seg::
Description
BnaC01g04670D
Coordinates
chrLK031789:+:2300188..2305502
Molecular Weight (calculated)
98421.7 Da
IEP (calculated)
8.480
GRAVY (calculated)
0.113
Length
936 amino acids
Sequence
(BLAST)
001: MESTFAAFST ITAMAPSLPL LTISKALHSH FSGARHLRPL LLARSSPASR SLGCFRASRI VSSSSLCYRT LGAAVLPVIR RRLQCLSSSS PSFRSISSGG
101: GGGFGGYNGG SGGGGGGGSD SGDLKAKLGG GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVATAS VNLTTETAIV WPVPEAKSVP DWQKTLGEAL
201: ANHLTNFGFD STPRDLVTEN FFKVFESKTK DKQARLKQSG RELAVSWALC AVCLVGHVTH FLGVKAPWLH AVHSTGFHVS LCLLTLLGPG RQLILDGFKS
301: LLNGSPNMNT LVGLGAMSSF SVSSLAALIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDSTVEVP CNSLSVGDLV
401: IILPGDRVPA DGIVKSGRSA IDESSFTGEP LPVTKEAGSQ VAAGSINLNG TLTVEVHRSG GETAVGDIVR MVEEAQSREA PVQQLVDKVA GRFTYGVMAI
501: SAATFTFWNL FGGHILPSAL HNGSPISLAL QLSCSVLVVA CPCALGLATP TAMLVGTSLG ARRGLLLRGG DILEKFSSVD TVVFDKTGTL TKGHPVVTGV
601: IIPQDSRHNL NDTLSEVDVL MLAAAVESNT THPVGKAIVK AARAHNCQTM KAEDGTFTEE PGSGAVAIVN NKRVAVGTLE WVQRHGATGN LLNASEENES
701: NNQSVVYIGV DNTLAAVIRF EDKIREDAAQ VVENLTRQGI DVYMLSGDKK SAANYVASVV GIPQDRVISG VKPAEKKKFI NDLQKNKNIV AMVGDGINDA
801: AALASSDVGV AMGGGAGAAS EVSPVVLMGN RLTQLLDALE LSRQTMKTVK QNLWWAFGYN IVGIPIAAGV LLPLTGTMLT PSMAGALMGV SSLGVMTNSL
901: LLRYRFFSNR EDKNVKWEPK EGSKQPHENE RWKESS
Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)
001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS
Arabidopsis Description
PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.