Factsheet for VIT_12s0142g00330.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 5
golgi 4
plasma membrane 5
extracellular 3
endoplasmic reticulum 3
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0486100-01	Rice	cytosol, plasma membrane	30.93	68.5
HORVU7Hr1G048770.2	Barley	endoplasmic reticulum, plasma membrane	45.15	63.29
Solyc01g105160.2.1	Tomato	plastid	71.56	43.66
KRH58274	Soybean	plasma membrane	72.23	43.42
TraesCS7A01G239700.1	Wheat	cytosol	66.37	36.61
OQU81022	Sorghum	cytosol	65.01	36.59
GSMUA_Achr7P12640_001	Banana	cytosol	68.85	36.53
KRH42155	Soybean	plastid	70.88	33.51
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	36.34	32.46
CDX68986	Canola	plastid	67.72	32.05
Bra011450.1-P	Field mustard	plastid	67.95	32.02
CDX75363	Canola	plastid	67.72	32.02
AT4G33520.2	Thale cress	plastid	66.59	31.09
TraesCS7D01G237500.1	Wheat	plastid	66.59	30.99
TraesCS7B01G135300.1	Wheat	plastid	66.37	30.88
Zm00001d052801_P004	Maize	plastid	65.24	29.86
VIT_04s0008g01960.t01	Wine grape	plastid	41.76	20.83
VIT_06s0004g01890.t01	Wine grape	plasma membrane	36.12	16.39
VIT_01s0011g01360.t01	Wine grape	cytosol	35.21	15.6
VIT_11s0103g00370.t01	Wine grape	plasma membrane	23.93	14.76
VIT_07s0129g01040.t01	Wine grape	plastid	25.96	13.87
VIT_02s0025g03630.t01	Wine grape	cytosol	36.57	8.37
VIT_12s0142g00400.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	1.13	1.82

Protein Annotations

EntrezGene:100257685	wikigene:100257685	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_cyto_dom_N	ProteinID:CBI32958	ProteinID:CBI32958.3	UniProt:D7TR35	EMBL:FN596011	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100257685
wikigene:LOC100257685	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR43520	PANTHER:PTHR43520:SF8	InterPro:P_typ_ATPase	SUPFAM:SSF56784	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0001BE3B55	ArrayExpress:VIT_12s0142g00330	EnsemblPlantsGene:VIT_12s0142g00330	EnsemblPlants:VIT_12s0142g00330.t01	unigene:Vvi.18112
RefSeq:XP_002274497	RefSeq:XP_002274497.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12_random:-:255824..290997

Molecular Weight (calculated)

47102.0 Da

IEP (calculated)

8.901

GRAVY (calculated)

0.080

Length

443 amino acids

Sequence
(BLAST)

001: MFWNLFGARI LPAAFHQGSS VSLALQLSCS VLVVACPCAL GLATPTAILV GTSLGATKGL LLRGGNILEK FSEMNTIVFD KTGTLTIGRP VVTKVVTPGC
101: EKDTDSRKSS KSIWSEVEVL KLAAGVESNT IHPVGKAIVE AARAVNCQNV KVVDGTFVEE PGSGAVATVE NKKVSVGTFD WVQRHGVQEN PFQEVDELKN
201: QSVVYVGVDG TLAGLIYFED QIRDDARHVV ESLSRQGISV YMLSGDKRNA AEHVASSVGI PKDKVLSGVK PNEKSKFIRE LQKAHNTVAM VGDGINDAAA
301: LASSDIGIAM GGGVGAASEV SSIVLMGNRL SQLLDAFELS RLTMKTVKQN LWWAFAYNIV GIPIAAGMLL PITGTMLTPS IAGALMGLSS VGVMTNSLLL
401: RSKFSAKQKQ IYEASPNSKA YLVPDRPGDQ KEKLKQHSYS PSR

Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)

001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS

Arabidopsis Description

PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.