Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g105160.2.1 | Tomato | plastid | 83.94 | 31.68 |
| KRH58274 | Soybean | plasma membrane | 80.29 | 29.85 |
| OQU81022 | Sorghum | cytosol | 74.82 | 26.05 |
| GSMUA_Achr7P12640_001 | Banana | cytosol | 79.2 | 25.99 |
| TraesCS7A01G239700.1 | Wheat | cytosol | 74.82 | 25.53 |
| KRH42155 | Soybean | plastid | 79.56 | 23.27 |
| CDX75363 | Canola | plastid | 78.83 | 23.05 |
| Bra011450.1-P | Field mustard | plastid | 78.1 | 22.77 |
| CDX68986 | Canola | plastid | 77.74 | 22.76 |
| AT4G33520.2 | Thale cress | plastid | 78.47 | 22.66 |
| TraesCS7B01G135300.1 | Wheat | plastid | 75.55 | 21.74 |
| TraesCS7D01G237500.1 | Wheat | plastid | 75.55 | 21.74 |
| Zm00001d052801_P004 | Maize | plastid | 74.82 | 21.18 |
| VIT_04s0008g01960.t01 | Wine grape | plastid | 47.45 | 14.64 |
| VIT_11s0103g00370.t01 | Wine grape | plasma membrane | 25.18 | 9.61 |
| VIT_01s0011g01360.t01 | Wine grape | cytosol | 31.75 | 8.7 |
| VIT_06s0004g01890.t01 | Wine grape | plasma membrane | 29.93 | 8.4 |
| VIT_07s0129g01040.t01 | Wine grape | plastid | 22.26 | 7.36 |
| VIT_02s0025g03640.t01 | Wine grape | golgi, peroxisome, plasma membrane | 11.68 | 6.45 |
| VIT_02s0025g03630.t01 | Wine grape | cytosol | 31.75 | 4.49 |
| VIT_12s0142g00330.t01 | Wine grape | golgi, plasma membrane | 1.82 | 1.13 |
| HORVU7Hr1G048770.2 | Barley | endoplasmic reticulum, plasma membrane | 1.09 | 0.95 |
| Os08t0486100-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_12s0142g00400 | EMBL:FN596011 | EnsemblPlants:VIT_12s0142g00400.t01 | EnsemblPlantsGene:VIT_12s0142g00400 | Gene3D:2.70.150.20 | InterPro:ATPase_P-typ_transduc_dom_A_sf |
| PANTHER:PTHR43520 | PANTHER:PTHR43520:SF10 | PFAM:PF00122 | ProteinID:CCB57225 | ProteinID:CCB57225.1 | SEG:seg |
| SUPFAM:SSF81653 | UniParc:UPI000210886D | UniProt:F6HRB7 | MapMan:24.1.2.1.1 | : | : |
Description
No Description!
Coordinates
chr12_random:-:332061..335121
Molecular Weight (calculated)
29282.6 Da
IEP (calculated)
7.564
GRAVY (calculated)
0.227
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEKRNKLKE SGRELAVSWA LCAVCLFGHL SHFLGTKASW IHAFHSTGFH LSLSLFTLLG PGRGLILDGL KSFLKGAPNM NTLVGLGAVS SFSVSSLAAL
101: IPELGWKAFF EEPIMLIAFV LLGRNLEQRA KIKATSDMTG LLSILPAKAR LFINGDSEEF SSTVEVPCNN LSVGDQIVVL PGDRVPADGI VRAGRSTVDE
201: SSFTGEPLPV TKLPGAEVSA GSINLNGTLR VEVRRPGGET AMGDIVRLVE AAQSREAPVQ RLADKVVFPV SLYL
101: IPELGWKAFF EEPIMLIAFV LLGRNLEQRA KIKATSDMTG LLSILPAKAR LFINGDSEEF SSTVEVPCNN LSVGDQIVVL PGDRVPADGI VRAGRSTVDE
201: SSFTGEPLPV TKLPGAEVSA GSINLNGTLR VEVRRPGGET AMGDIVRLVE AAQSREAPVQ RLADKVVFPV SLYL
001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVRIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVRIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS
Arabidopsis Description
PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.