CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58274	Soybean	plasma membrane	75.45	95.93
VIT_12s0142g00400.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	23.27	79.56
Solyc01g105160.2.1	Tomato	plastid	55.18	71.21
VIT_12s0142g00330.t01	Wine grape	golgi, plasma membrane	33.51	70.88
GSMUA_Achr7P12640_001	Banana	cytosol	60.62	68.02
OQU81022	Sorghum	cytosol	56.14	66.84
TraesCS7A01G239700.1	Wheat	cytosol	56.88	66.38
Os08t0486100-01	Rice	cytosol, plasma membrane	13.87	65.0
CDX68986	Canola	plastid	64.89	64.96
CDX75363	Canola	plastid	64.78	64.78
Bra011450.1-P	Field mustard	plastid	64.67	64.47
AT4G33520.2	Thale cress	plastid	64.78	63.96
TraesCS7D01G237500.1	Wheat	plastid	60.83	59.87
HORVU7Hr1G048770.2	Barley	endoplasmic reticulum, plasma membrane	20.17	59.81
TraesCS7B01G135300.1	Wheat	plastid	60.73	59.77
Zm00001d052801_P004	Maize	plastid	60.3	58.37
KRH52252	Soybean	plastid	38.53	39.98
KRH61581	Soybean	plastid	21.13	39.21
KRH41158	Soybean	plasma membrane	26.15	36.14
KRH59857	Soybean	cytosol	8.64	33.06
KRH27938	Soybean	plasma membrane	8.64	28.52
KRH66147	Soybean	cytosol	28.92	28.41
KRH07428	Soybean	cytosol	27.53	28.26
KRG95266	Soybean	cytosol	29.35	27.95
KRH37212	Soybean	cytosol	29.24	27.79
KRH77529	Soybean	cytosol	28.92	27.74
KRH42397	Soybean	cytosol	28.92	27.26
KRH12191	Soybean	cytosol	28.92	27.21
KRH77528	Soybean	mitochondrion	25.08	27.17
KRH58516	Soybean	cytosol	28.82	27.16
KRH02816	Soybean	plasma membrane	20.38	25.53
KRH37273	Soybean	cytosol, plasma membrane, vacuole	22.73	24.07
KRH04519	Soybean	plastid	19.21	22.03
KRH57989	Soybean	plasma membrane, plastid	19.42	21.88
KRH19069	Soybean	plasma membrane	21.66	18.52

Protein Annotations

EntrezGene:100777857	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02004791	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_08G072400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	UniProt:I1KR29	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	EnsemblPlants:KRH42155	ProteinID:KRH42155	ProteinID:KRH42155.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00943	ScanProsite:PS00154	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF8	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01511	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI00023C59C9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:5539129..5554575

Molecular Weight (calculated)

99533.1 Da

IEP (calculated)

8.080

GRAVY (calculated)

0.115

Length

937 amino acids

Sequence
(BLAST)

001: MDSAFSINTT AQVALFRALH GHLHRAPQRA LLRRNLKCLV TSYNSSSNCC RIPCSFGSVP SPSSLRSFRG LLPRTPRCIS SSAASFASPA GGGNGGAGTG
101: DGDGGGGSGG ESGDANLKLV GDASQELSAL SPDVIILDVS GMVCGGCAAT VKRILENQPQ VSSASVNLTT ETAIVWPVSE AKNAPNWQKQ LGEALAEHLT
201: SCGYNSSLRD STRDNFLQIF ERKMEERHRQ LRESGRELAV SWALCAVCLV GHFSHFFAAK APWIHVFHSI GFHLSLSLFT LLGPGRQLIL DGLKSLLKRT
301: PNMNTLVGLG ALSSFTVSSF AALLPKLGWK AFFEEPIMLI AFVLLGRNLE QRAKIKAASD MTGLLSLLPP KARLLLNNGE TEVGSVVEVP SDSLSVGDQI
401: IVLPGDRIPA DGVVRSGRST VDESSFTGEP LPVTKVPGSE VAAGSINLNG TLTMEVQRPG SETAMANIVR LVEEAQSREA PVQRLADKVA GHFTYGVMAT
501: SAATFTFWSL YGTHILPPAL YQGRAVSLAL QLACSVLVVA CPCALGLATP TAVLVGTSLG AKRGLLLRGG NILEKFAMVD TVVFDKTGTL TVGRPVVTNI
601: VIPICIKNAI SSQTEENALS DVEVLRLAAA VETNSVHPVG KAIVDAAQAA NCHNAKVKDG TFLEEPGSGA VATIYDKKVS VGTLEWITRH GVINSIHQEV
701: EKSNNQSFVY VGVDDTLAGL IYFEDEIRED ARDVVDRLSK QNIGVYMLSG DKRNAAEHVA SLVGIPKEKV LSEVKPDEKK KFINELQKDN NIVAMVGDGI
801: NDAAALASSH VGIALGGGVG AASEVSSIVL MRNQLSQIVD ALELSRLTMN TIKQNLWWAF IYNIVGIPIA AGVLFPINGT VLTPSIAGAL MGLSSIGVMT
901: NSLLLRFKFS SKQKQIHSIS PKTKIHVAQN QKTNHPY

Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)

001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS

Arabidopsis Description

PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.