CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	48.98	90.91
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	77.96	38.51
KRH41158	Soybean	plasma membrane	91.02	32.89
CDX91834	Canola	cytosol, peroxisome, plasma membrane	80.0	22.84
KRG95266	Soybean	cytosol	90.2	22.46
AT1G63440.1	Thale cress	mitochondrion	80.82	19.9
Solyc08g080870.2.1	Tomato	cytosol	76.73	19.71
CDY50396	Canola	cytosol	75.92	19.12
Bra003110.1-P	Field mustard	cytosol	75.51	18.94
CDY49160	Canola	cytosol	75.1	18.91
KRH77529	Soybean	cytosol	74.69	18.73
CDY34353	Canola	mitochondrion	77.96	18.51
CDY25498	Canola	mitochondrion	77.96	18.47
KRH77528	Soybean	mitochondrion	62.45	17.69
Bra027641.1-P	Field mustard	mitochondrion	77.96	16.02
KRH07428	Soybean	cytosol	58.78	15.77
KRH66147	Soybean	cytosol	58.78	15.09
KRH12191	Soybean	cytosol	56.73	13.96
KRH37212	Soybean	cytosol	55.92	13.89
KRH42397	Soybean	cytosol	55.1	13.58
KRH58516	Soybean	cytosol	54.29	13.38
KRH58274	Soybean	plasma membrane	33.06	10.99
VIT_02s0025g03630.t01	Wine grape	cytosol	79.59	10.07
KRH02816	Soybean	plasma membrane	28.16	9.22
CDX93870	Canola	endoplasmic reticulum, plasma membrane	26.12	8.77
KRH42155	Soybean	plastid	33.06	8.64
KRH52252	Soybean	plastid	31.84	8.64
KRH04519	Soybean	plastid	27.76	8.32
KRH57989	Soybean	plasma membrane, plastid	28.16	8.29
KRH37273	Soybean	cytosol, plasma membrane, vacuole	26.12	7.23
KRH19069	Soybean	plasma membrane	28.98	6.48
KRH61581	Soybean	plastid	3.67	1.78
KRH27938	Soybean	plasma membrane	0.0	0.0

Protein Annotations

MapMan:24.1.2.1.1	Gene3D:3.40.50.1000	UniProt:A0A0R0JYV2	EMBL:ACUP02003342	EnsemblPlantsGene:GLYMA_05G206700	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	EnsemblPlants:KRH59857	ProteinID:KRH59857	ProteinID:KRH59857.1	PFAM:PF00702
PRINTS:PR00119	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF56784	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0006EE1036	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:38934250..38935288

Molecular Weight (calculated)

26164.1 Da

IEP (calculated)

6.022

GRAVY (calculated)

0.314

Length

245 amino acids

Sequence
(BLAST)

001: MVNKTLMADH NVALPVDSEE ILAAAEGMAQ TGIIVSINRE VVGVLVVSDP LKPAAQEVIS ILKSMKIRSI MVTGDNWGTA NPIAREVGIE TVIAEAKPEI
101: RNSRRGFEAS GYRGMVGDGI NDSPALVAAD VGMAIGAGTD IAIEAADIVL MKSNLEDVIT AIDLSRKTFS RIRLNYVWAL GYNLLGIPIA AGALFPSTRF
201: RLPPWIAGAA MAASSVSVVC CSLLLKYYRR PKKLDNLEIR GISIE

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.