CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	13.99	90.91
KRH41158	Soybean	plasma membrane	64.57	81.71
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	46.39	80.24
KRH59857	Soybean	cytosol	22.84	80.0
GSMUA_Achr5P12290_001	Banana	plasma membrane	51.98	79.64
CDX93870	Canola	endoplasmic reticulum, plasma membrane	63.05	74.11
HORVU2Hr1G097010.1	Barley	plasma membrane	57.93	73.96
CDY34353	Canola	mitochondrion	84.5	70.25
CDY50396	Canola	cytosol	79.6	70.2
CDY49160	Canola	cytosol	79.02	69.68
CDY25498	Canola	mitochondrion	83.92	69.63
KRG95266	Soybean	cytosol	75.99	66.26
Solyc08g080870.2.1	Tomato	cytosol	73.43	66.04
KRH77528	Soybean	mitochondrion	64.34	63.81
GSMUA_Achr5P12300_001	Banana	cytosol	56.76	61.1
Zm00001d002708_P001	Maize	mitochondrion	69.46	59.66
CDY67984	Canola	cytosol, peroxisome, plasma membrane	17.02	59.59
Os04t0556000-01	Rice	plastid	69.58	59.58
TraesCS2B01G429200.2	Wheat	mitochondrion	68.76	59.36
EES11247	Sorghum	mitochondrion	69.23	59.28
TraesCS2D01G407800.5	Wheat	plastid	68.53	58.8
TraesCS2A01G410400.3	Wheat	mitochondrion	68.88	58.46
Zm00001d002705_P002	Maize	cytosol, plastid	68.53	56.76
KXG26864	Sorghum	cytosol, plasma membrane, plastid	68.41	54.25
GSMUA_Achr1P00300_001	Banana	cytosol	55.24	53.92
CDY26408	Canola	golgi, nucleus, plasma membrane	9.79	48.55
CDY39400	Canola	cytosol	48.6	41.74
CDY50771	Canola	cytosol	48.25	41.65
VIT_02s0025g03630.t01	Wine grape	cytosol	75.64	33.52
CDY69037	Canola	cytosol	21.21	31.16
CDY51647	Canola	golgi, plasma membrane, vacuole	12.35	30.64
CDY67659	Canola	cytosol	21.1	30.42
CDX92394	Canola	plastid	29.72	28.81
CDY16605	Canola	plastid	29.49	28.59
CDX75363	Canola	plastid	30.89	28.28
CDX68986	Canola	plastid	30.77	28.21
CDY69827	Canola	plasma membrane	19.93	27.14
CDY67922	Canola	cytosol	7.34	26.47
CDY67923	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	5.01	25.75
CDY69511	Canola	plasma membrane	20.86	25.0
CDX68627	Canola	cytosol, plasma membrane, vacuole	21.68	24.54
CDX68625	Canola	plasma membrane	20.63	24.25
CDY28160	Canola	cytosol	21.33	24.14
CDY62400	Canola	plasma membrane	24.13	23.74
CDY30170	Canola	cytosol, peroxisome, plasma membrane	23.78	23.31
CDY28206	Canola	plasma membrane	18.18	21.64
CDX69288	Canola	plastid	20.4	21.37
CDX75636	Canola	mitochondrion	20.28	21.3
CDY72630	Canola	golgi, plasma membrane, vacuole	8.62	21.26
CDY46080	Canola	plastid	16.43	20.89
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	13.17	20.7
CDY51090	Canola	cytosol	22.49	17.74
CDY36489	Canola	cytosol	22.84	17.06
CDY51690	Canola	cytosol, plasma membrane, vacuole	3.03	15.2
CDY51646	Canola	cytosol, plasma membrane, vacuole	3.38	14.87
CDY08717	Canola	cytosol, nucleus, plasma membrane	22.84	12.57
CDY51648	Canola	cytosol	0.23	2.94

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078DTL2
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDX91834	ProteinID:CDX91834
ProteinID:CDX91834.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00153441001	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942
PRINTS:PR00943	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0004EDB05B	SEG:seg	:	:	:

Description

BnaC03g31360D

Coordinates

chrLK031870:-:180090..183501

Molecular Weight (calculated)

92853.4 Da

IEP (calculated)

5.849

GRAVY (calculated)

0.279

Length

858 amino acids

Sequence
(BLAST)

001: MTCTSCSSTV ERALKSVNGV ERAHVALAIE EAEIHYDPSL VSSEKLLEAI ENAGFEAILI STRTGEDVSK ITLKIDGEFT DESITIIERS LEAIHGVQKV
101: EINPGNDKIS VLYNPDVTGP RNFIRVIEST VFAGHIKATI FTEGGVGRDS QNQGEIKQYC KSFLWSLVFT APVFLTAMVF MYIPGVKNML MFKVVNMLNV
201: GEIIRWVLAT PVQFFIGWRF YIGSYKALRR GSANMDVLVA LGTNAAYFYS LYTVLRAATS PDFMGVDFFE TSAMLISFII LGKYLEVLAR GKTSEAIAKL
301: MNLAPETAML LNLDNEGHVT GEEEIDGRLI QKNDIIKIIP GAKVASDGYV IWGQSHVNES MITGEARPVA KRKGDTVIGG TLNENGVLHV KVTRVGSESA
401: LAQIVGLVES AQLAKAPVQK LADQISKFFV PLVIFVSLST WLAWFIAGKL HWYPESWIPS SMVSFELALQ FGISVMVIAC PCALGLATPT AVMVGTGVGA
501: SQGVLIKGGL ALERAHKVTC IVFDKTGTLT MGKPVVVKTK ILNSMVIGDF YEIVAATEVN SEHPLAKAIV EYAKIFKDEQ ENHAWPEARD FVSITGKGVK
601: ATVRGIKVMV GNKKLMCDHG VSIPDDAQEL LAEAEEMAQT GILVSINGEL AGFVAVSDPL KPIAGEAISI LKSMNIVSIM VTGDNWGTAN SIAREVGIDS
701: VFAEAKPEQK AEKVKELQAM GHVVAMVGDG INDSPALVAA DVGMAIGAGT DIAIEAADIV LMKSNLEDVI TAIDLSRKTF SRIRLNYVWA LGYNLMGIPI
801: AAGVLFPYTR FRLPPWIAGA AMAASSVSVV CCSLLLKNYK RPKKLDNLEI REIQVERV

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.