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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plastid
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011450.1-P Field mustard plastid 98.51 98.19
CDX68986 Canola plastid 97.65 97.76
AT4G33520.2 Thale cress plastid 91.36 90.2
VIT_12s0142g00400.t01 Wine grape endoplasmic reticulum, plasma membrane, plastid 23.05 78.83
KRH58274 Soybean plasma membrane 54.64 69.47
Solyc01g105160.2.1 Tomato plastid 53.79 69.42
VIT_12s0142g00330.t01 Wine grape golgi, plasma membrane 32.02 67.72
GSMUA_Achr7P12640_001 Banana cytosol 59.77 67.07
OQU81022 Sorghum cytosol 55.92 66.58
TraesCS7A01G239700.1 Wheat cytosol 56.14 65.5
KRH42155 Soybean plastid 64.78 64.78
Os08t0486100-01 Rice cytosol, plasma membrane 13.55 63.5
HORVU7Hr1G048770.2 Barley endoplasmic reticulum, plasma membrane 19.85 58.86
TraesCS7D01G237500.1 Wheat plastid 59.77 58.82
TraesCS7B01G135300.1 Wheat plastid 59.66 58.72
Zm00001d052801_P004 Maize plastid 60.3 58.37
CDY16605 Canola plastid 38.74 41.02
CDX92394 Canola plastid 38.63 40.9
CDY26408 Canola golgi, nucleus, plasma membrane 6.83 36.99
CDY67984 Canola cytosol, peroxisome, plasma membrane 9.5 36.33
CDX91834 Canola cytosol, peroxisome, plasma membrane 28.28 30.89
CDY67923 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 5.23 29.34
CDY49160 Canola cytosol 28.92 27.85
CDY50396 Canola cytosol 28.71 27.65
CDY50771 Canola cytosol 29.24 27.57
CDY39400 Canola cytosol 29.03 27.23
CDY67922 Canola cytosol 6.83 26.89
CDY34353 Canola mitochondrion 29.46 26.74
CDY51647 Canola golgi, plasma membrane, vacuole 9.82 26.59
CDY25498 Canola mitochondrion 29.14 26.4
CDX93870 Canola endoplasmic reticulum, plasma membrane 20.06 25.75
CDY69827 Canola plasma membrane 17.29 25.71
CDY28160 Canola cytosol 18.78 23.22
CDX68627 Canola cytosol, plasma membrane, vacuole 18.68 23.09
CDY69511 Canola plasma membrane 17.4 22.77
CDX75636 Canola mitochondrion 19.32 22.15
CDY72630 Canola golgi, plasma membrane, vacuole 8.22 22.13
CDX69288 Canola plastid 19.32 22.1
CDX68625 Canola plasma membrane 17.08 21.92
CDY30170 Canola cytosol, peroxisome, plasma membrane 20.38 21.83
CDY62400 Canola plasma membrane 20.06 21.56
CDY46080 Canola plastid 15.37 21.33
CDY69037 Canola cytosol 12.59 20.21
CDY67659 Canola cytosol 12.49 19.66
CDX68623 Canola cytosol, endoplasmic reticulum, plasma membrane 11.42 19.6
CDY28206 Canola plasma membrane 14.83 19.28
CDY51690 Canola cytosol, plasma membrane, vacuole 3.2 17.54
CDY51090 Canola cytosol 19.96 17.19
CDY36489 Canola cytosol 20.81 16.97
CDY51646 Canola cytosol, plasma membrane, vacuole 3.42 16.41
CDY08717 Canola cytosol, nucleus, plasma membrane 20.49 12.32
CDY51648 Canola cytosol 0.32 4.41
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078CJW0
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDX75363ProteinID:CDX75363
ProteinID:CDX75363.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00121244001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sfInterPro:Heavy-metal-associated_CSInterPro:IPR006121InterPro:IPR023214
InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00403PFAM:PF00702PRINTS:PR00119
PRINTS:PR00943ScanProsite:PS00154ScanProsite:PS01047PFscan:PS50846PANTHER:PTHR43520PANTHER:PTHR43520:SF8
InterPro:P_typ_ATPaseSUPFAM:SSF55008SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01511TIGRFAMs:TIGR01525TMHMM:TMhelixUniParc:UPI0004EE6DC1SEG:seg:
Description
BnaA01g03390D
Coordinates
chrLK031804:+:805505..810648
Molecular Weight (calculated)
98522.1 Da
IEP (calculated)
8.729
GRAVY (calculated)
0.108
Length
937 amino acids
Sequence
(BLAST)
001: MESTFAAFST ITAMAPSLPL LTISKALRRH FSGARHLRPL LLARSSPASR SLGCFRASRI VSSSSVCYRS LGAAVLPVIR RRLQCLSSSS PSFRSISSGG
101: GGIGGYNGGS GGGGGGGGGS ESGDLKAKVG GGVSVPSSDI IILDVGGMTC GGCSASVKKI LESQPQVATA SVNLTTETAI VWPVPEAKSV PDWQKTLGET
201: LANHLTNCGF ESTPRDLVTE NFFKVFESKT KDKQARLKQS GRELAVSWAL CAVCLVGHLT HFLGVKAPWL HAVHSTGFHV SLCLLTLLGP GRQLILDGFK
301: SLLKGSPNMN TLVGLGAMSS FSVSSLAALI PKLGWKTFFE EPVMLIAFVL LGRNLEQRAK IKATSDMTGL LSVLPSKARL LLDGDSTVEV PCNSLSVGDL
401: VVILPGDRVP ADGIVKSGRS AIDESSFTGE PLPVTKEAGS QVAAGSINLN GTLTVEVHRS GGETAVGDIV RMVEEAQSRE APVQQLVDKV AGRFTYGVMA
501: ISAATFTFWN LFGGHILPSA LHNGSPISLA LQLSCSVLVV ACPCALGLAT PTAMLVGTSL GARRGLLLRG GDILEKFSSV DTVVFDKTGT LTKGHPVVTE
601: VIIPQDSRHN LNDTLSEVDV LMLAAAVESN TTHPVGKAIV KAARAHNCQT MKAEDGTFTE EPGSGAVAIV NNKRVAVGTL EWVQRHGATG NLLNASEENE
701: SNNQSVVYIG VDNTLAAVIR FEDKIREDAA QVVENLTRQG IDVYMLSGDK KSAANYVASV VGIPQDRVIS GVKPAEKKKF INELQKNKNI VAMVGDGIND
801: AAALASSDVG VAMGGGAGAA SEVSPVVLMG NRLTQLLDAM ELSRQTMKTV KQNLWWAFGY NIVGIPVAAG VLLPLTGTML TPSMAGALMG VSSLGVMTNS
901: LLLRYRFFSN REDKNVKWEP KEGTKQPHEN TRLKESS
Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)
001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS
Arabidopsis Description
PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.