Factsheet for Zm00001d052801_P004

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81022	Sorghum	cytosol	76.96	94.66
TraesCS7A01G239700.1	Wheat	cytosol	71.18	85.8
Os08t0486100-01	Rice	cytosol, plasma membrane	17.56	85.0
TraesCS7D01G237500.1	Wheat	plastid	79.86	81.2
TraesCS7B01G135300.1	Wheat	plastid	79.65	80.99
HORVU7Hr1G048770.2	Barley	endoplasmic reticulum, plasma membrane	25.83	79.11
VIT_12s0142g00400.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	21.18	74.82
GSMUA_Achr7P12640_001	Banana	cytosol	60.85	70.54
Solyc01g105160.2.1	Tomato	plastid	51.65	68.87
KRH58274	Soybean	plasma membrane	50.31	66.08
VIT_12s0142g00330.t01	Wine grape	golgi, plasma membrane	29.86	65.24
CDX68986	Canola	plastid	58.37	60.36
Bra011450.1-P	Field mustard	plastid	58.57	60.32
KRH42155	Soybean	plastid	58.37	60.3
CDX75363	Canola	plastid	58.37	60.3
AT4G33520.2	Thale cress	plastid	58.88	60.06
Zm00001d027884_P003	Maize	plastid	36.26	38.91
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	6.71	35.52
Zm00001d027860_P001	Maize	plasma membrane	6.1	35.12
Zm00001d015829_P003	Maize	plasma membrane	28.72	28.37
Zm00001d053783_P001	Maize	plasma membrane	29.03	28.16
Zm00001d002708_P001	Maize	mitochondrion	27.48	26.63
Zm00001d002705_P002	Maize	cytosol, plastid	28.1	26.25
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	27.27	25.53
Zm00001d005190_P001	Maize	plastid	20.97	22.61
Zm00001d014569_P002	Maize	plastid	18.8	22.11
Zm00001d005189_P001	Maize	plasma membrane	21.38	21.47
Zm00001d014669_P007	Maize	plasma membrane	20.66	18.2
Zm00001d019226_P003	Maize	cytosol	16.22	17.58

Protein Annotations

EntrezGene:100381708	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
UniProt:A0A1D6QK34	ProteinID:AQK58102.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009767	GO:GO:0009941	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016531	GO:GO:0030001	GO:GO:0035434
GO:GO:0046872	GO:GO:0055070	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF8	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0008452C46	EnsemblPlantsGene:Zm00001d052801	EnsemblPlants:Zm00001d052801_P004	EnsemblPlants:Zm00001d052801_T004
SEG:seg	:	:	:	:	:

Description

Copper-transporting ATPase PAA1 chloroplastic

Coordinates

chr4:+:201400731..201410178

Molecular Weight (calculated)

101671.0 Da

IEP (calculated)

8.630

GRAVY (calculated)

0.194

Length

968 amino acids

Sequence
(BLAST)

001: MDPTTPVLAL SKAFASSRTK PFLLLAPHRR RSLFAARASA PSSSSVPGDL LISLARLALR GPGPPAAPRR WFASVSSASP LASGGPPRGG GGRGNGDGDG
101: GGGGDGWKRP RASQGAGVVE EAAAQGADVI VLDVGGMSCG GCAASVKRIL ESEPQVRSAT VNLATEMAVV WAVPEDSVVQ DWKEQLGEKL ANQLTTCGYK
201: SNLRDSSKVG SQTVFERKMQ DKLEQLKQSG RELAVSWALC AVCLVGHISH LFGVNMPLMH VIHSTGFHLS LSIFTFVGPG RRLILDGLKS LLKGSPNMNT
301: LVGLGALSSF AVSSIAAFIP KLGWKTFFEE PVMLIAFVLL GKNLEQRAKL KATSDMTGLL SILPSKARLM VDNDAEKSSL IEVPCDTLAV GDYVVVLPGD
401: HIPADGIVKA GRSTVDESSL TGEPMPVTKI TGAEVSAGSI NLNGKLTVEV RRPGGETVMS DILHLVEEAQ TRAAPVQRLA DKVAGNFTYG VMALSAATYM
501: FWSILGSQLV PAAIQHGGAM SLALQLSCSV LVIACPCALG LATPTAVLVG TSLGATRGLL LRGGDVLEKF SDVDAVVFDK TGTLTIGRPV ITKVIPSRGM
601: GDANTKLSLL CTPVLYVVLY YTRLIDVKVK IISKTFLLTN HISVIRDLGA NQWAEADILS FAAGVESNTN HPLGKAIMEA AGAANCVIMK ANDGSFMEEP
701: GSGAVATIGE KQVSVGTLDW IRRHGVIHNP FPEAEHFGQS VAYVAVNGAL AGLICFEDKL RGDSRQVIET LSKQGISVYM LSGDKESAAM NVASVVGIQA
801: DKVLAEVKPH EKKKFISELQ KEHKVVAMVG DGINDAAALA SADVGIAMGG GVGAASDVSS VVLMGNRLSQ LIDALELSKE TMKTVKQNLW WAFLYNIVGL
901: PIAAGALLPA TGTILTPSIA GALMGFSSVG VMANSLLLRV RLSSRRKREP LKAISDEVEK NYSSKWST

Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)

001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS

Arabidopsis Description

PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.