Factsheet for GSMUA_Achr7P12640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00400.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	25.99	79.2
TraesCS7A01G239700.1	Wheat	cytosol	69.46	72.23
OQU81022	Sorghum	cytosol	67.9	72.05
Solyc01g105160.2.1	Tomato	plastid	62.28	71.63
Os08t0486100-01	Rice	cytosol, plasma membrane	17.13	71.5
KRH58274	Soybean	plasma membrane	60.84	68.93
VIT_12s0142g00330.t01	Wine grape	golgi, plasma membrane	36.53	68.85
HORVU7Hr1G048770.2	Barley	endoplasmic reticulum, plasma membrane	24.91	65.82
TraesCS7B01G135300.1	Wheat	plastid	70.9	62.18
TraesCS7D01G237500.1	Wheat	plastid	70.78	62.08
Zm00001d052801_P004	Maize	plastid	70.54	60.85
KRH42155	Soybean	plastid	68.02	60.62
CDX75363	Canola	plastid	67.07	59.77
CDX68986	Canola	plastid	66.71	59.51
Bra011450.1-P	Field mustard	plastid	66.95	59.47
AT4G33520.2	Thale cress	plastid	67.31	59.22
GSMUA_Achr8P30620_001	Banana	cytosol	40.6	42.16
GSMUA_Achr5P12290_001	Banana	plasma membrane	26.35	39.29
GSMUA_Achr8P06970_001	Banana	cytosol	33.65	29.77
GSMUA_Achr5P12300_001	Banana	cytosol	27.43	28.73
GSMUA_Achr5P26800_001	Banana	cytosol	31.38	27.99
GSMUA_Achr3P11880_001	Banana	cytosol	30.06	27.73
GSMUA_Achr1P00300_001	Banana	cytosol	27.31	25.94
GSMUA_Achr4P30180_001	Banana	plasma membrane	22.99	25.13
GSMUA_Achr5P22660_001	Banana	plasma membrane	23.11	23.62
GSMUA_Achr8P24660_001	Banana	cytosol	23.11	20.51
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	22.52	20.11
GSMUA_Achr9P16140_001	Banana	plastid	20.72	20.09

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009767	GO:GO:0009941	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016531	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0035434	GO:GO:0046872	GO:GO:0055070	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr7G12640_001
EnsemblPlants:GSMUA_Achr7P12640_001	EnsemblPlants:GSMUA_Achr7T12640_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0TH02	InterPro:P-typ_ATPase_IB
PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
ScanProsite:PS01047	ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF8	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01511
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI000294F256	SEG:seg	:	:

Description

Putative copper-transporting ATPase PAA1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G12640_001]

Coordinates

chr7:-:10154048..10170966

Molecular Weight (calculated)

88896.9 Da

IEP (calculated)

8.400

GRAVY (calculated)

0.129

Length

835 amino acids

Sequence
(BLAST)

001: MQPVSLAGES GEASTRGSDV IILDVGGMSC GGCAASVKRI LESQPQVSSA NVNLATETAI VWAISEAKVM PNWKQQLGNR LAGHLTTCGF KSSLRDSARD
101: SFYKVFERKM DEKLQNLKES GRELAVSWAL CAVCLLGHLS HFFKAGPSWI HTCHSTSFHL SLSLFTFLGP GRKLVLDGFR SLLMGSPNMN TLVGLGALSS
201: FAVSSIAAIM PKLGWKTFFE EPIMLIAFVL LGKNLEQRAK IKATSDMTGL LNILPTKARL MVDSDAGKVP SLVEVPCSSL SIGDQIVVLP GDRVPADGIV
301: KAGRSSIDES SFTGEPLPVT KLPGAEVTAG SINLNGTLTI EVKRPGGETA MGDIVRLVEN AQTRGAPVQR LADKVAGHFT YAVMALSAAT FTFWSLFGSQ
401: LVPAALKHGS SMSLALQLSC SVLVVACPCA LGLATPTAVL VGTSLGATRG LLLRGGDVLE KFAAVDAVVF DKTGTLTTGK PVVTRVITHQ HGEHEYSYET
501: PKFKWTEADI LRLAASVESN TNHPVGKAIV EAARSVGSQN VKVIDGTFSE EPGSGVVAVV DQKKVAVGTL SWLRRHGVVD NPFPDAELNN QSVVYVGVDS
601: ALAGLIYFED KIREDAPHVV ETLSKQGINI YMLSGDKKNA AEYVASMVGI DKTKVISEVK PEEKKMFISE LQKNQKVVVM VGDGINDAAA LASADIGIAM
701: GEGVGAASDV SSIVLMGNRL SQLIDALDLS KVTMKTVKQN LWWAFAYNIV GIPVAAGILL PSTGTMLTPS IAGALMGLSS VGVMTNSLFL RFRAGKGKKH
801: MHKHQRQSRD IPDSDILVQI DNEAQKPYPV KWRNS

Best Arabidopsis Sequence Match ( AT4G33520.2 )
(BLAST)

001: MESTLSAFST VKATAMARSS GGPSLPLLTI SKALNRHFTG ARHLHPLLLA RCSPSVRRLG GFHGSRFTSS NSALRSLGAA VLPVIRHRLE CLSSSSPSFR
101: SISSGGGSGF GGYNGGSGGG GGGGSESGDS KSKLGANASD GVSVPSSDII ILDVGGMTCG GCSASVKKIL ESQPQVASAS VNLTTETAIV WPVPEAKSVP
201: DWQKSLGETL ANHLTNCGFQ STPRDLVTEN FFKVFETKTK DKQARLKESG RELAVSWALC AVCLVGHLTH FLGVNAPWIH AIHSTGFHVS LCLITLLGPG
301: RKLVLDGIKS LLKGSPNMNT LVGLGALSSF SVSSLAAMIP KLGWKTFFEE PVMLIAFVLL GRNLEQRAKI KATSDMTGLL SVLPSKARLL LDGDLQNSTV
401: EVPCNSLSVG DLVVILPGDR VPADGVVKSG RSTIDESSFT GEPLPVTKES GSQVAAGSIN LNGTLTVEVH RSGGETAVGD IIRLVEEAQS REAPVQQLVD
501: KVAGRFTYGV MALSAATFTF WNLFGAHVLP SALHNGSPMS LALQLSCSVL VVACPCALGL ATPTAMLVGT SLGARRGLLL RGGDILEKFS LVDTVVFDKT
601: GTLTKGHPVV TEVIIPENPR HNLNDTWSEV EVLMLAAAVE SNTTHPVGKA IVKAARARNC QTMKAEDGTF TEEPGSGAVA IVNNKRVTVG TLEWVKRHGA
701: TGNSLLALEE HEINNQSVVY IGVDNTLAAV IRFEDKVRED AAQVVENLTR QGIDVYMLSG DKRNAANYVA SVVGINHERV IAGVKPAEKK NFINELQKNK
801: KIVAMVGDGI NDAAALASSN VGVAMGGGAG AASEVSPVVL MGNRLTQLLD AMELSRQTMK TVKQNLWWAF GYNIVGIPIA AGVLLPLTGT MLTPSMAGAL
901: MGVSSLGVMT NSLLLRYRFF SNRNDKNVKP EPKEGTKQPH ENTRWKQSS

Arabidopsis Description

PAA1Copper-transporting ATPase PAA1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SZC9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.