Factsheet for GSMUA_Achr1P00300_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P07500_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G63440.1	GSMUA_Achr6P07500_001	AT1G66240.1	16367966

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P12290_001	Banana	plasma membrane	52.9	83.04
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	12.4	82.58
VIT_02s0025g03640.t01	Wine grape	golgi, peroxisome, plasma membrane	43.0	76.21
GSMUA_Achr5P12300_001	Banana	cytosol	67.01	73.9
HORVU2Hr1G097010.1	Barley	plasma membrane	51.08	66.82
Solyc08g080870.2.1	Tomato	cytosol	62.91	57.97
TraesCS2B01G429200.2	Wheat	mitochondrion	64.51	57.04
Zm00001d002708_P001	Maize	mitochondrion	64.05	56.36
TraesCS2D01G407800.5	Wheat	plastid	63.82	56.1
Os04t0556000-01	Rice	plastid	63.94	56.09
EES11247	Sorghum	mitochondrion	63.82	55.99
TraesCS2A01G410400.3	Wheat	mitochondrion	64.28	55.89
CDX91834	Canola	cytosol, peroxisome, plasma membrane	53.92	55.24
AT1G63440.1	Thale cress	mitochondrion	62.12	54.87
KRH77529	Soybean	cytosol	59.39	53.43
CDY50396	Canola	cytosol	58.82	53.13
Zm00001d002705_P002	Maize	cytosol, plastid	62.57	53.09
KRH27938	Soybean	plasma membrane	17.06	52.82
CDY49160	Canola	cytosol	58.13	52.52
Bra003110.1-P	Field mustard	cytosol	58.13	52.3
CDY34353	Canola	mitochondrion	61.32	52.23
CDY25498	Canola	mitochondrion	61.32	52.13
KXG26864	Sorghum	cytosol, plasma membrane, plastid	62.8	51.02
CDX93870	Canola	endoplasmic reticulum, plasma membrane	40.39	48.63
Bra027641.1-P	Field mustard	mitochondrion	61.32	45.22
GSMUA_Achr3P11880_001	Banana	cytosol	45.16	43.87
GSMUA_Achr8P06970_001	Banana	cytosol	44.25	41.21
GSMUA_Achr5P26800_001	Banana	cytosol	42.21	39.64
VIT_02s0025g03630.t01	Wine grape	cytosol	64.96	29.49
GSMUA_Achr7P12640_001	Banana	cytosol	25.94	27.31
GSMUA_Achr8P30620_001	Banana	cytosol	23.55	25.75
GSMUA_Achr4P30180_001	Banana	plasma membrane	18.43	21.2
GSMUA_Achr5P22660_001	Banana	plasma membrane	19.0	20.44
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	19.23	18.07
GSMUA_Achr8P24660_001	Banana	cytosol	19.11	17.85
GSMUA_Achr9P16140_001	Banana	plastid	17.18	17.54

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030001
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr1G00300_001	EnsemblPlants:GSMUA_Achr1P00300_001	EnsemblPlants:GSMUA_Achr1T00300_001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0RVT8
PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI000296BDB0	SEG:seg

Description

Putative copper-transporting ATPase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G00300_001]

Coordinates

chr1:+:243913..250671

Molecular Weight (calculated)

95738.0 Da

IEP (calculated)

9.070

GRAVY (calculated)

0.208

Length

879 amino acids

Sequence
(BLAST)

001: MTCAACAGSV EKAIKRLPGI HDAAVDVLND RAQVIFYPTF VSFPGTTYSI DITELKEYTI RETIEDVGFG AALIKVEMKE KSALTHGLHI KGTTSSSSNI
101: EYVLQAIPSV QKTSVVLATK EAEVFHDPRF VSADQLNKEV EDTGCGSIFV TTGEDMNRIE LKTGPRNFIE MIESIGSGHL KASIYPQVRR KELHSIGELL
201: RWILSTPVQF IIGRRFYVGS YKALRHGSAN MDVLIALGTN AAYFYSLYSY LEILAKGKTS MAIAKLMDLT PENAILLSYD NEGNVVNERE IDSRLIQKDD
301: VIKRKGDTVI GGTVNENGVL HVRATNVGSE SALSQIVRLI ESAQMAKAPV QKFADRISKY FVIVLATFTW LIWFLAGKFN SYPKSWIPSS MDSFQLALQF
401: GISVMVIACP CALGLATPTA VMVGTGVGAS QGVLIKGGQA LESAHKVRHI IHSLPVFVTI PANHECLYSI CRYSMQLVIV SLSFIIASLR RTETRIMVCF
501: VKNPIQGVQL LGASKRLTTV VVCDQILKVE NSITMRKKAI RKRRTNIRIT FSLTPFGAEI SGTLFSVNCV VFDKTGTLTT GKPVVVSTRL LKNMVLRDFY
601: EYVAAAEVNS EHPLAKAIVQ YANKFGRDEV NHVWPEAQDF TAITGHGVKA SVGNKQVIRM AQTGIIASID REITGIIAIS DPLKPGAREV ISLLSSMKVK
701: SIMVTGDNWG TANAIAKEVG IDTVMAEAKP DQKAEKVKQL QMSGFTVAMI GDGINDSPAL VSADVGMAIG AGTDIAIEAA DIVLMKSNLE DVITAIDLSR
801: KTFFRISTNY VWALGYNIVG IPIAAGVLFP FTGFRLPPWV AGAAMAASSV SVVCCSLLLR NYRRPTKLDT LVMSKVVVD

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.