CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
plasma membrane 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27938	Soybean	plasma membrane	24.16	83.1
PGSC0003DMT400032161	Potato	cytosol, plasma membrane, vacuole	10.95	81.06
KRH41158	Soybean	plasma membrane	55.68	80.24
GSMUA_Achr5P12290_001	Banana	plasma membrane	44.32	77.32
KRH59857	Soybean	cytosol	18.73	74.69
HORVU2Hr1G097010.1	Barley	plasma membrane	50.26	73.07
KRG95266	Soybean	cytosol	72.16	71.65
KRH77528	Soybean	mitochondrion	62.54	70.64
Solyc08g080870.2.1	Tomato	cytosol	68.47	70.13
GSMUA_Achr5P12300_001	Banana	cytosol	53.22	65.24
Zm00001d002708_P001	Maize	mitochondrion	66.12	64.66
TraesCS2B01G429200.2	Wheat	mitochondrion	65.51	64.39
Os04t0556000-01	Rice	plastid	65.92	64.27
TraesCS2D01G407800.5	Wheat	plastid	65.61	64.1
EES11247	Sorghum	mitochondrion	65.61	63.97
TraesCS2A01G410400.3	Wheat	mitochondrion	65.3	63.11
Zm00001d002705_P002	Maize	cytosol, plastid	64.18	60.52
GSMUA_Achr1P00300_001	Banana	cytosol	53.43	59.39
KXG26864	Sorghum	cytosol, plasma membrane, plastid	64.48	58.23
KRH66147	Soybean	cytosol	50.97	52.2
KRH07428	Soybean	cytosol	47.49	50.82
KRH37212	Soybean	cytosol	46.57	46.15
KRH12191	Soybean	cytosol	46.16	45.28
KRH58516	Soybean	cytosol	45.34	44.57
KRH42397	Soybean	cytosol	44.83	44.06
KRH58274	Soybean	plasma membrane	25.49	33.79
KRH61581	Soybean	plastid	15.35	29.7
KRH42155	Soybean	plastid	27.74	28.92
KRH52252	Soybean	plastid	26.41	28.57
KRH02816	Soybean	plasma membrane	18.83	24.6
KRH37273	Soybean	cytosol, plasma membrane, vacuole	20.37	22.49
KRH57989	Soybean	plasma membrane, plastid	18.42	21.63
KRH04519	Soybean	plastid	17.91	21.42
KRH19069	Soybean	plasma membrane	21.09	18.8

Protein Annotations

EntrezGene:100817431	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02000679	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_01G219100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046872	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS
UniProt:I1JA65	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH77529	ProteinID:KRH77529
ProteinID:KRH77529.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002336B76	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:54880021..54887792

Molecular Weight (calculated)

106257.0 Da

IEP (calculated)

7.069

GRAVY (calculated)

0.126

Length

977 amino acids

Sequence
(BLAST)

001: MGKKFEGWEC SLQCSGNLSP QAHYPMRRLE EEGRDSEGKK VVLSVMGMSC AACAGSIEKA IKRLPGIREA VVDVLNHKAQ VLYYPQMLHE QRIREAIEDA
101: GFEAKVMEED SKDTSTQICR IHVRGMTCTS CSSTIESALQ SLHGVHKARV ALTTEEAEVC YDPKIVTHNH FMSAIEETGF EAVLISTGEH ITKIELQIDG
201: IKNEQSLNVI ERSLHELPGV ETIDIYPDIN KISITYKPYM TGPRTFIEVI ESTGSGCFKA IIFPNDGGRE AQRQEEINRF FKLFIWSLAF TIPVFLTSMV
301: LMYIPGVKRV LDIKVVNMLN IGLLLRCEFA TPVQFIIGRR FYVGAYKALR KGSANMDVLI ALGTNAAYFY SLYVVERAAS SRHFKGSDFF ETSSMLISFI
401: LLGKYLEVLA KGKTSQAIAK LMNLTPETAT LLTQDDEGNV VSERQIDSRL IQKEDVIKVV PGAKVASDGF VIWGQSHVNE SMITGEAKPV AKRKGDMVIG
501: GTLNENGVLH VKVTRVGSES ALSQIVRLVE SAQMAKAPVQ KIADHISKYF VPMVIALSLS TWLSWFLAGK FHAYPKSWIP SSTNSFELAL QFGISVMVIA
601: CPCALGLATP TAVMVGTGVG ATQGVLIKGG QALENAHKVN CIVFDKTGTL TVGKPVVVTT KLLKKTSLSN FYEFAAAAEV NSEHPIAKAI VEHAKKIIEE
701: EQNHPWPEAR DFASVSGHGV KAIVLNKEIM VGNKKMMLDH NIAISAEAEE TLAEAESLAQ TGILVSLDGE VAGVLAVSDP LKPGAKEVIS ILNLMKIKSI
801: MVTGDNWGTA NSIARQAGIE TVMAEALPET KATKIKELKS SGYTVAMVGD GINDSPALVA ADVGMAIGAG TDIAIEAADI VLMKSNLEDT IIAIDLAKKT
901: FSRIRLNYIW ALGYNLLAIP IAAGVLYSST RFRLPPWIAG AAMAASSLSV VCSSLLLKNY RRPSLLNNLD MNAIKIE

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.