CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07428	Soybean	cytosol	90.78	94.85
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	23.38	75.08
VIT_06s0004g01890.t01	Wine grape	plasma membrane	73.48	71.82
EES04697	Sorghum	cytosol, plastid	69.71	68.28
Zm00001d015829_P003	Maize	plasma membrane	69.71	67.86
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.59	67.26
TraesCS6A01G158900.1	Wheat	plastid	68.13	66.74
TraesCS6B01G192400.1	Wheat	cytosol, plastid	68.34	66.53
HORVU6Hr1G033380.2	Barley	cytosol	68.24	65.96
TraesCS6D01G153600.1	Wheat	cytosol	68.24	65.36
GSMUA_Achr3P11880_001	Banana	cytosol	61.64	64.97
KRH41158	Soybean	plasma membrane	43.29	60.91
KRH59857	Soybean	cytosol	15.09	58.78
KRH27938	Soybean	plasma membrane	16.35	54.93
KRH77528	Soybean	mitochondrion	48.53	53.53
KRG95266	Soybean	cytosol	54.3	52.64
KRH77529	Soybean	cytosol	52.2	50.97
KRH37212	Soybean	cytosol	46.75	45.23
KRH12191	Soybean	cytosol	46.33	44.38
KRH42397	Soybean	cytosol	45.49	43.66
KRH58516	Soybean	cytosol	45.18	43.36
KRH58274	Soybean	plasma membrane	25.37	32.84
KRH42155	Soybean	plastid	28.41	28.92
KRH61581	Soybean	plastid	15.3	28.91
KRH52252	Soybean	plastid	26.83	28.35
KRH02816	Soybean	plasma membrane	19.5	24.87
KRH37273	Soybean	cytosol, plasma membrane, vacuole	22.33	24.07
KRH04519	Soybean	plastid	18.66	21.79
KRH57989	Soybean	plasma membrane, plastid	18.76	21.51
KRH19069	Soybean	plasma membrane	20.75	18.07

Protein Annotations

EntrezGene:100793894	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02001906	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_03G086000
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0043231	GO:GO:0046872	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS
UniProt:I1JM65	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH66147	ProteinID:KRH66147
ProteinID:KRH66147.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417
InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002336D69	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:25351483..25363612

Molecular Weight (calculated)

102527.0 Da

IEP (calculated)

5.401

GRAVY (calculated)

0.260

Length

954 amino acids

Sequence
(BLAST)

001: MEANGIGELK IPLLQTPEDG AVRTVYFQLS DIKCASCVNS VESVVKNLDG VKSIAVSPLD GRAAIKFDPK FVTVKQIKES IEESGFRVNE LHEQDIAVCR
101: VRIKGMACTS CSESVENALQ IVEGVKKAIV GLALEEAKVH FDPNLTNVDK IIEAIDDAGF GADLISSGND ANKVHLKLEG VDSAEDVNAV MSSLELAVGV
201: NHVEMDLSEH KVTVSYDPDI TGPRSLIYCV QEEASCGSKK YQATLYSPSG QRERDKVNEI RMYRDQFLFS CLFSVPVFVF AMVLPMLPPY GNWLNYKVHN
301: MLTLGLFLRC ILSTPVQFIV GKRFYVGSYH SLKRKSANMD VLVALGTNAA YFYSLYILIK ALTSDTFEGQ DFFETSSMLI SFILLGKYLE IVAKGKTSDA
401: LGKLTQLVPD KAYLVAIDTD GNIITETEID TQLIQKNDII KIVPGSKIPV DGIVIKGQSY ANESMITGEA RPVDKSPGDK VISGTINENG CILVKATHVG
501: SDTALSQIVQ LVQAAQLAKA PVQKLADHIS RVFVPIVVVV ALITWLGWFI PGEAGIYPKH WIPKAMDAFE LALQFAISVL VVACPCALGL ATPTAVMVAS
601: GMGASQGVLI KGGDALEKAH KVKIVVFDKT GTLTVGKPEV VSAVLFSEFS MEELCDMTIA VEASSEHPIA KAVAAHAKRL RQKFGSCTEE VPDVDDFEVH
701: MGAGVSGKVG DRTVVVGNRR LMHACNVPIC SKVEKYISEN EILARTCILV SIDGKIAGAF SVTDPVKPEA KRVISFLHSM GISSIIVTGD NCATATAIAN
801: EVGIDEVFAE IDPVGKADKV KDLQMKGMTV AMVGDGINDS PALVAADVGM AIGAGTDIAI EAADIVLVKS SLEDVITAID LSRKTMSRIR LNYIWALGYN
901: ILGMPIAAGV LYPFAGIRLP PWLAGACMAA SSLSVVSSSL LLQFYKKPLH IESS

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.