Factsheet for Solyc11g062100.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g01890.t01	Wine grape	plasma membrane	72.74	50.31
Zm00001d015829_P003	Maize	plasma membrane	69.48	47.86
EES04697	Sorghum	cytosol, plastid	68.89	47.74
KRH66147	Soybean	cytosol	67.26	47.59
TraesCS6B01G192400.1	Wheat	cytosol, plastid	67.7	46.63
TraesCS6A01G158900.1	Wheat	plastid	67.26	46.61
HORVU6Hr1G033380.2	Barley	cytosol	68.0	46.5
TraesCS6D01G153600.1	Wheat	cytosol	67.7	45.88
KRH07428	Soybean	cytosol	61.48	45.45
GSMUA_Achr3P11880_001	Banana	cytosol	58.96	43.98
Solyc08g080890.2.1	Tomato	cytosol	46.67	35.39
Solyc08g080870.2.1	Tomato	cytosol	49.63	35.12
Solyc02g068490.2.1	Tomato	cytosol	42.67	28.71
Solyc01g105160.2.1	Tomato	plastid	19.85	18.46
Solyc08g061610.2.1	Tomato	plastid	23.85	18.01
Solyc02g092920.2.1	Tomato	plastid	14.81	12.18
Solyc07g009130.2.1	Tomato	plastid	17.33	8.99
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	0.59	1.35

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030001	GO:GO:0046872	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf
InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4D922	PFAM:PF00122
PFAM:PF00403	PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093
PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF81653	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc11g062100.1
EnsemblPlants:Solyc11g062100.1.1	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002769525	SEG:seg

Description

No Description!

Coordinates

chr11:+:48972023..48975932

Molecular Weight (calculated)

73299.2 Da

IEP (calculated)

5.315

GRAVY (calculated)

0.227

Length

675 amino acids

Sequence
(BLAST)

001: MEANGKDELK KPLLQDDDAV AVTVVQLSDS RNKKIRTLLF KVNGITCASC SNSIESALEK LKGIESATVS PLQGQAVVKY VPELISAKMI KEAVEDTGFL
101: VDEFPEQDIA ICWIRIKGMA CTSCSESVER ALSMIDGVKK AVVGLSLEEA KVHFDPNVSS TSRIIEAVED AGFGADIISS GSDLNKVHFK LEGINSPDDF
201: TAIQCCLDAL EGVNTVDINQ QEHRVTISYE PDIIGPRTLM QCIQESGHES STYRASLFIP PRQREIEKEQ EIHTYRNLFL WSCLFSVPIF VFSMVLPMLP
301: PYGKWLEYKV FNMLTVGILL KWILCTPVQF VIGRRFYAGS YHALRRVSAN MDVLIALGTN AAYFYSVYIM VKALTSNSFE GQDFFETSPM LISFILLGKY
401: LEVLAKGKTS DALAKLTELA PETAYLLTLD GAGNIISETE ISSQLIQKND VLKIVPGAKV PVDGVVINGH SYVNESMITG EARPVSKMPG DKVIGGTVNE
501: NGCVLIKATH IGSETALSQI VQLVEAAQLA RAPVQKLADQ ISRFFVPTVV LAATVTWLGW FIPGELGVYP SSWTPKGMNV FELAFQFGIS VLVVACPCAL
601: GLATPTAIMV ATGKGASQGV LIKGGNALEK AHKVKLVVFD KTGTLTVGKP SVVSAVLFSN ISMKDFCDVT ISAEM

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.