Factsheet for Solyc11g062120.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07428	Soybean	cytosol	74.41	24.21
GSMUA_Achr3P11880_001	Banana	cytosol	71.72	23.54
KRH66147	Soybean	cytosol	75.08	23.38
VIT_06s0004g01890.t01	Wine grape	plasma membrane	76.43	23.26
EES04697	Sorghum	cytosol, plastid	72.73	22.18
Zm00001d015829_P003	Maize	plasma membrane	71.72	21.73
TraesCS6A01G158900.1	Wheat	plastid	70.37	21.46
TraesCS6B01G192400.1	Wheat	cytosol, plastid	70.37	21.33
HORVU6Hr1G033380.2	Barley	cytosol	70.71	21.28
TraesCS6D01G153600.1	Wheat	cytosol	70.03	20.88
Solyc08g080890.2.1	Tomato	cytosol	55.89	18.65
Solyc08g080870.2.1	Tomato	cytosol	59.6	18.55
Solyc02g068490.2.1	Tomato	cytosol	52.86	15.65
Solyc01g105160.2.1	Tomato	plastid	34.01	13.91
Solyc08g061610.2.1	Tomato	plastid	34.01	11.3
Solyc02g092920.2.1	Tomato	plastid	26.6	9.62
Solyc07g009130.2.1	Tomato	plastid	25.93	5.91
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	1.35	0.59

Protein Annotations

MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4D924	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81660
EnsemblPlantsGene:Solyc11g062120.1	EnsemblPlants:Solyc11g062120.1.1	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002769527	SEG:seg

Description

No Description!

Coordinates

chr11:+:48986198..48988548

Molecular Weight (calculated)

31646.4 Da

IEP (calculated)

6.601

GRAVY (calculated)

0.226

Length

297 amino acids

Sequence
(BLAST)

001: MCAIIANSEH PIAKAVVDHA KKLRLKHGAE NEYHPEIENF EVHTGAGVSG KVGERKILVG NRRLMHAFNV PVSSEVDNYI SEHEHLARTC VLVAVDEKIA
101: GAFAVTDPVK PDAARVISFL HSMDITSVMV TGDNWATARA IASEVGIQTV FAETDPLGKA DKIKELQLKG TPVAMVGDGI NDSPALVAAD VGMAIGAGTD
201: VAIEAADIVL IKSNLEDVVT AIDLSRKTMS RIRLNYVWAL GYNVLGMPVA AGVLFPFTGI RLPPWLAGAC MAASSISVVC SSLLLQSYKK PLNTRVN

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.