Factsheet for Zm00001d015829_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04697	Sorghum	cytosol, plastid	95.61	96.2
TraesCS6B01G192400.1	Wheat	cytosol, plastid	87.55	87.55
TraesCS6A01G158900.1	Wheat	plastid	86.73	87.27
HORVU6Hr1G033380.2	Barley	cytosol	87.76	87.13
TraesCS6D01G153600.1	Wheat	cytosol	87.65	86.25
GSMUA_Achr3P11880_001	Banana	cytosol	67.24	72.82
Solyc11g062120.1.1	Tomato	cytosol, peroxisome, plasma membrane	21.73	71.72
VIT_06s0004g01890.t01	Wine grape	plasma membrane	71.22	71.52
KRH66147	Soybean	cytosol	67.86	69.71
Solyc11g062100.1.1	Tomato	cytosol, peroxisome, plasma membrane	47.86	69.48
KRH07428	Soybean	cytosol	63.88	68.57
Zm00001d002708_P001	Maize	mitochondrion	56.22	55.16
Zm00001d002705_P002	Maize	cytosol, plastid	55.92	52.9
Zm00001d053783_P001	Maize	plasma membrane	46.84	45.99
Zm00001d027860_P001	Maize	plasma membrane	7.86	45.83
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	8.06	43.17
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	43.16	40.91
Zm00001d027884_P003	Maize	plastid	26.53	28.82
Zm00001d052801_P004	Maize	plastid	28.37	28.72
Zm00001d005190_P001	Maize	plastid	22.86	24.94
Zm00001d014569_P002	Maize	plastid	19.18	22.84
Zm00001d005189_P001	Maize	plasma membrane	21.53	21.89
Zm00001d014669_P007	Maize	plasma membrane	21.43	19.11
Zm00001d019226_P003	Maize	cytosol	16.53	18.14

Protein Annotations

EntrezGene:103626849	Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
UniProt:A0A1D6H478	ProteinID:AQK69629.1	ProteinID:AQK69630.1	ProteinID:AQK69631.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001
GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB
PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
ScanProsite:PS01047	PFscan:PS50846	PANTHER:PTHR24093	PANTHER:PTHR24093:SF417	InterPro:P_typ_ATPase	SUPFAM:SSF55008
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI0004DE7DBC	EnsemblPlantsGene:Zm00001d015829	EnsemblPlants:Zm00001d015829_P003	EnsemblPlants:Zm00001d015829_T003	SEG:seg

Description

Probable copper-transporting ATPase HMA5

Coordinates

chr5:-:124544275..124549833

Molecular Weight (calculated)

105979.0 Da

IEP (calculated)

5.423

GRAVY (calculated)

0.134

Length

980 amino acids

Sequence
(BLAST)

001: MITATGMERN GESHLKDPLL PTTSGASPAG ASPRKERKTR KVLFSVRGIS CASCAVSIET VVAGLNGVES IQVSSLQGQA VVQYRPEETD ARTIKEAIED
101: LNFEVDELQE QEIAVCRLRI KGMACTSCSE SVERALQMVP GVKKAAVGLA LEEAKVHYDP NVTSRDRIIE AVEDAGFGAD LISSGDDVNK VHLKLEGVNS
201: PEDTILIQSV LEAVEGVNNV EWDTVEQTIE VAYDPDFTGP RLLIQCIQDT AQPPKCFNVT LHSPPKQREA ERNHEIRNYR NQFLWSCLFS VPVFLFSMVL
301: PMLSPFGDWL EYRICNNMTI GMLLRWLLCS PVQFIVGWRF YVGAYHALKR GYSNMDVLVA LGTNAAYFYS VYIVLKALTS DSFEGQDFFE TSAMLISFIL
401: LGKYLEIVAK GKTSDALSKL TELAPETACL LTLDKDGNAI SETEISTQLL QRNDVIKIVP GTKVPVDGVV IKGQSHVNES MITGEARPIA KKPGDRVIGG
501: TVNDNGCIIV KATHVGSETA LSQIVQLVEA AQLARAPVQK LADKISRFFV PTVVVAAFLT WLGWFIPGQL HLYPQQWIPK AMDSFELALQ FGISVLVVAC
601: PCALGLATPT AVMVATGKGA SQGVLIKGGN ALEKAHKIKA IIFDKTGTLT VGKPSVVQTK VFSKIPLLEL CDLAAGAEAN SEHPLSKAIV EHTKKLKEQY
701: GSHSDHMMES RDFEVHPGAG VSAHIEGRLV LVGNKRLMQE FEVPLSPEVE AYMSETEELA RTCVLVAIDK IICGALAVSD PLKPKAGQVI SYLKSMGISS
801: IMVTGDNWAT AKSIAKEVGI SQVFAEIDPV GKAEKIKDLQ MQGLTVAMVG DGVNDSPALA AADVGMAIGA GTDVAIEAAD IVLMKSNLED VITAIDLSRK
901: TLSRIRLNYV WALGYNVLGM PIAAGVLFPF TGIRLPPWLA GACMAASSVS VVCSSLLLQL YKKPLHVEDA PRPREDSDLV

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.