Factsheet for Zm00001d011553_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d031132_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	Zm00001d031132_P002	AT1G66240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027860_P001	Maize	plasma membrane	73.77	80.36
CDY26408	Canola	golgi, nucleus, plasma membrane	37.16	39.31
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	93.99	16.63
KXG20553	Sorghum	plasma membrane	90.16	16.39
TraesCS7A01G480100.1	Wheat	cytosol	83.61	15.28
TraesCS7B01G382300.1	Wheat	cytosol	83.61	15.28
TraesCS7D01G467100.1	Wheat	cytosol	83.61	15.28
Os06t0665800-01	Rice	cytosol	81.97	14.96
Zm00001d053783_P001	Maize	plasma membrane	81.42	14.93
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	83.06	14.86
GSMUA_Achr5P26800_001	Banana	cytosol	73.77	14.42
GSMUA_Achr8P06970_001	Banana	cytosol	71.58	13.88
VIT_01s0011g01360.t01	Wine grape	cytosol	67.76	12.4
KRH58516	Soybean	cytosol	65.57	12.07
KRH37212	Soybean	cytosol	65.03	12.07
AT5G44790.1	Thale cress	cytosol	65.57	11.99
KRH42397	Soybean	cytosol	65.03	11.97
CDY50771	Canola	cytosol	65.03	11.97
CDY39400	Canola	cytosol	65.03	11.91
KRH12191	Soybean	cytosol	64.48	11.85
PGSC0003DMT400024409	Potato	cytosol	63.93	11.68
Solyc02g068490.2.1	Tomato	cytosol	63.93	11.66
Bra025102.1-P	Field mustard	cytosol	62.84	11.53
Bra027573.1-P	Field mustard	cytosol	62.3	11.38
Zm00001d002708_P001	Maize	mitochondrion	49.18	9.01
Zm00001d002705_P002	Maize	cytosol, plastid	48.63	8.59
Zm00001d015829_P003	Maize	plasma membrane	43.17	8.06
Zm00001d027884_P003	Maize	plastid	33.33	6.76
Zm00001d052801_P004	Maize	plastid	35.52	6.71
Zm00001d005190_P001	Maize	plastid	26.23	5.35
Zm00001d019226_P003	Maize	cytosol	24.59	5.04
Zm00001d014569_P002	Maize	plastid	22.4	4.98
Zm00001d005189_P001	Maize	plasma membrane	25.68	4.88
Zm00001d014669_P007	Maize	plasma membrane	26.78	4.46
CDY69037	Canola	cytosol	7.65	2.4
CDY67659	Canola	cytosol	7.65	2.35
CDY67984	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6G139	ProteinID:AQK97169.1	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00122	PANTHER:PTHR43520
PANTHER:PTHR43520:SF14	SUPFAM:SSF81660	SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI000845534D	EnsemblPlantsGene:Zm00001d011553
EnsemblPlants:Zm00001d011553_P001	EnsemblPlants:Zm00001d011553_T001	:	:	:	:

Description

Copper-transporting ATPase RAN1

Coordinates

chr8:-:154359742..154360633

Molecular Weight (calculated)

19546.0 Da

IEP (calculated)

7.452

GRAVY (calculated)

0.692

Length

183 amino acids

Sequence
(BLAST)

001: MIIADIISFV FQVASIFVPI VITLSIVTFS AWFLCGWLGA YPKSWVAENS NCFVFSLMFA ISVVVIACPC ALGLATPTVV MVATGIGANH GVLVKGGDAL
101: ERAQNVNYVV FDKTGKLTQG KAIVTAAKVF PGMDLGDFLT LVASAEASSE HPLAKAILDY ALHFHFFGKL PSSKDGIEQR KDK

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.