Factsheet for Zm00001d019226_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96100	Sorghum	cytosol	57.0	54.56
Zm00001d005189_P001	Maize	plasma membrane	58.79	54.46
CDY51647	Canola	golgi, plasma membrane, vacuole	20.27	52.31
Zm00001d005190_P001	Maize	plastid	47.7	47.44
VIT_11s0103g00370.t01	Wine grape	plasma membrane	31.8	39.55
GSMUA_Achr5P22660_001	Banana	plasma membrane	34.71	37.94
CDY69827	Canola	plasma membrane	26.43	37.46
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	30.91	36.13
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	21.95	35.9
CDY69511	Canola	plasma membrane	28.67	35.75
CDX68627	Canola	cytosol, plasma membrane, vacuole	30.35	35.75
CDY28160	Canola	cytosol	30.35	35.75
Bra011165.1-P	Field mustard	cytosol	30.24	35.62
CDX68625	Canola	plasma membrane	28.22	34.52
Bra011164.1-P	Field mustard	cytosol, plasma membrane	33.37	34.17
CDY62400	Canola	plasma membrane	33.26	34.06
KRH02816	Soybean	plasma membrane	28.44	33.96
CDY30170	Canola	cytosol, peroxisome, plasma membrane	33.26	33.94
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	35.39	33.8
GSMUA_Achr8P24660_001	Banana	cytosol	35.39	33.58
Zm00001d014669_P007	Maize	plasma membrane	40.87	33.21
AT4G30120.1	Thale cress	cytosol	19.82	32.66
KRH37273	Soybean	cytosol, plasma membrane, vacuole	32.03	32.32
AT4G30110.1	Thale cress	plasma membrane	33.82	31.76
Bra024107.1-P	Field mustard	plasma membrane	31.13	31.48
CDY28206	Canola	plasma membrane	23.52	29.13
KRH19069	Soybean	plasma membrane	33.59	27.37
CDY51090	Canola	cytosol	31.8	26.1
AT2G19110.2	Thale cress	cytosol	33.59	25.6
CDY36489	Canola	cytosol	32.92	25.59
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	5.04	24.59
Zm00001d027860_P001	Maize	plasma membrane	4.59	24.4
Solyc07g009130.2.1	Tomato	plastid	35.5	24.35
Bra024449.1-P	Field mustard	cytosol	31.69	23.78
CDY51690	Canola	cytosol, plasma membrane, vacuole	4.48	23.39
Bra038842.1-P	Field mustard	cytosol	32.03	22.5
CDY51646	Canola	cytosol, plasma membrane, vacuole	4.82	22.05
CDY08717	Canola	cytosol, nucleus, plasma membrane	33.03	18.92
CDY72630	Canola	golgi, plasma membrane, vacuole	7.28	18.68
Zm00001d014569_P002	Maize	plastid	16.46	17.86
Zm00001d053783_P001	Maize	plasma membrane	18.59	16.63
Zm00001d015829_P003	Maize	plasma membrane	18.14	16.53
Zm00001d002708_P001	Maize	mitochondrion	18.25	16.32
Zm00001d052801_P004	Maize	plastid	17.58	16.22
Zm00001d027884_P003	Maize	plastid	16.24	16.08
Zm00001d002705_P002	Maize	cytosol, plastid	18.37	15.83
CDY51648	Canola	cytosol	1.12	14.71
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	17.02	14.7

Protein Annotations

EntrezGene:100191729	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6HW91
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM52497.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase
SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI000845383D	EnsemblPlantsGene:Zm00001d019226	EnsemblPlants:Zm00001d019226_P003	EnsemblPlants:Zm00001d019226_T003	SEG:seg	:

Description

Cadmium/zinc-transporting ATPase HMA2

Coordinates

chr7:+:22695904..22699252

Molecular Weight (calculated)

94105.6 Da

IEP (calculated)

10.808

GRAVY (calculated)

-0.255

Length

893 amino acids

Sequence
(BLAST)

001: MPGPAVEAAA RSGGDHHGGC CGKAAGKWEK TYLDVLGICC TAEVALVERL LTPIQGVRAV TVVVPSRTVI VDHDTAAVSQ FHIGSEQGGP RGLRPSLWQQ
101: RRRRRAVAQP VHRRLRRPAR PVPARAAAPP AAVAGGGGGL RGLPAHAAPG VRRGGQADAG HQHPDAHRGR RLRGARELHG GRRHRVPLHR RRVAGDAGVQ
201: QGQRRDAVPH VHGAQDRRAG RDGAGRRHGR RRGRHRRRGQ GRRRGPRGRR GRRRAQRGRR EQPHRRVLPR AEAAAVGGLG RHHQLRRLHL REDDGPRREL
301: DGGEDGEAGG GGPEQPVSDA AAHRLVRQAL HPCVVVSFAC AAVVVLAAGV VLVPALLGAR DLELEHWFRL SLVLLVSACP CALVLSTPVA TFCALLRAAR
401: MGLLVKGGNV LESLGEVRVA AFDKTGTITR GEFSIKDFHV VGDKVEMNQL LYWVSSIESK SSHPMAAALV EYAQSKSVQP KPENVTETCI YHGEGIYGVM
501: DGKQIYIGNE RIIARSSCRH HQHGTQAGHQ ETDGLKGVSI GHVICDGDLV GKFSLSDTCR TGAAEAILQL RSMGIKSVML TGDSAAAAKH AQEQLGGVLE
601: ELHAGLLPED KVRLVRGLQA RHGATLMVGD GMNDAPALAA ADVGVSMGLS GSAAAIETSH AALMSGDILR VPKAVRLGRR ARRTIAVNVA SSVGAKAAVL
701: ALAVAWRPVL WVAVLADVGT CLLVVLHSML LLRDGAARRP RCCASATACK SKQASKPCCA TVKPVATTRH RHGHGHGHGH AGAGKPGTLG GDKQGKDCHG
801: CCQKESKPPE DAVVIAIPGR AVEHRKEAFP HENAGAGGCC AAAHGAEDEV CIVISARSPC CSTARSRSGS PKDALCCHGS GGKDGGAISA LVC

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.