Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- golgi 3
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30170 | Canola | cytosol, peroxisome, plasma membrane | 77.29 | 84.0 |
| CDY62400 | Canola | plasma membrane | 76.97 | 83.94 |
| Bra011164.1-P | Field mustard | cytosol, plasma membrane | 76.45 | 83.37 |
| CDY69511 | Canola | plasma membrane | 61.93 | 82.26 |
| CDX68625 | Canola | plasma membrane | 62.99 | 82.05 |
| Bra024107.1-P | Field mustard | plasma membrane | 74.87 | 80.63 |
| CDY28206 | Canola | plasma membrane | 58.15 | 76.7 |
| CDX68623 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 42.27 | 73.63 |
| AT4G30120.1 | Thale cress | cytosol | 40.59 | 71.22 |
| VIT_11s0103g00370.t01 | Wine grape | plasma membrane | 51.73 | 68.52 |
| KRH02816 | Soybean | plasma membrane | 47.42 | 60.29 |
| AT2G19110.2 | Thale cress | cytosol | 71.19 | 57.76 |
| TraesCS7B01G320900.1 | Wheat | plasma membrane | 45.64 | 56.66 |
| GSMUA_Achr5P22660_001 | Banana | plasma membrane | 46.58 | 54.22 |
| HORVU5Hr1G094430.8 | Barley | endoplasmic reticulum, plasma membrane | 41.22 | 51.24 |
| TraesCS7A01G420000.1 | Wheat | plasma membrane | 48.37 | 48.99 |
| KRH19069 | Soybean | plasma membrane | 56.36 | 48.91 |
| TraesCS7D01G412800.1 | Wheat | plasma membrane | 48.37 | 48.68 |
| GSMUA_Achr8P24660_001 | Banana | cytosol | 47.95 | 48.46 |
| TraesCS5A01G383400.1 | Wheat | plasma membrane | 41.32 | 48.16 |
| TraesCS5B01G388000.1 | Wheat | plasma membrane | 41.96 | 48.13 |
| TraesCS7D01G412400.1 | Wheat | plasma membrane | 50.26 | 47.66 |
| HORVU7Hr1G097210.4 | Barley | plasma membrane | 47.32 | 47.57 |
| GSMUA_Achr5P21940_001 | Banana | extracellular, plasma membrane | 46.69 | 47.49 |
| HORVU7Hr1G097240.1 | Barley | plasma membrane | 50.37 | 47.47 |
| TraesCS5D01G392700.1 | Wheat | plasma membrane | 41.96 | 46.78 |
| TraesCS7A01G419500.1 | Wheat | plasma membrane | 48.27 | 46.6 |
| TraesCS7B01G320100.2 | Wheat | plasma membrane | 49.95 | 46.43 |
| Os06t0700700-02 | Rice | plasma membrane | 50.05 | 44.61 |
| EER90320 | Sorghum | plasma membrane | 49.84 | 44.34 |
| Zm00001d005190_P001 | Maize | plastid | 41.11 | 43.54 |
| EER96099 | Sorghum | cytosol | 40.9 | 43.46 |
| EER96100 | Sorghum | cytosol | 41.96 | 42.77 |
| Zm00001d014669_P007 | Maize | plasma membrane | 49.32 | 42.68 |
| Zm00001d005189_P001 | Maize | plasma membrane | 41.96 | 41.39 |
| Os07t0232900-01 | Rice | cytosol, nucleus, plasma membrane | 42.59 | 40.34 |
| Solyc07g009130.2.1 | Tomato | plastid | 54.99 | 40.17 |
| Zm00001d019226_P003 | Maize | cytosol | 31.76 | 33.82 |
| AT5G21930.1 | Thale cress | plastid | 20.19 | 21.74 |
| AT5G44790.1 | Thale cress | cytosol | 22.61 | 21.48 |
| AT4G37270.1 | Thale cress | plasma membrane, plastid | 18.19 | 21.12 |
| AT1G63440.1 | Thale cress | mitochondrion | 21.56 | 20.6 |
| AT4G33520.2 | Thale cress | plastid | 19.98 | 20.02 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | EntrezGene:829134 |
| ProteinID:AEE85722.1 | ProteinID:ANM67783.1 | ArrayExpress:AT4G30110 | EnsemblPlantsGene:AT4G30110 | RefSeq:AT4G30110 | TAIR:AT4G30110 |
| RefSeq:AT4G30110-TAIR-G | EnsemblPlants:AT4G30110.1 | TAIR:AT4G30110.1 | InterPro:ATPase_P-typ_P_site | InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N |
| InterPro:ATPase_P-typ_transduc_dom_A_sf | EMBL:AY054390 | EMBL:AY434728 | Unigene:At.31858 | ProteinID:CAB43846.1 | ProteinID:CAB81004.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008551 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016463 | GO:GO:0016787 | GO:GO:0019829 |
| GO:GO:0030001 | GO:GO:0046872 | GO:GO:0055069 | GO:GO:0070574 | GO:GO:0071577 | GO:GO:0099132 |
| InterPro:HAD-like_sf | InterPro:HAD_sf | Symbol:HMA2 | InterPro:HMA_dom | InterPro:HMA_dom_sf | InterPro:IPR006121 |
| InterPro:IPR023214 | InterPro:IPR023299 | RefSeq:NP_001320088.1 | RefSeq:NP_194740.1 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 |
| PFAM:PF00702 | PO:PO:0000013 | PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0005020 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009066 | PO:PO:0009071 | PO:PO:0020030 | PO:PO:0020094 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | PFscan:PS50846 | PANTHER:PTHR43338 | InterPro:P_typ_ATPase |
| UniProt:Q9SZW4 | SUPFAM:SSF55008 | SUPFAM:SSF56784 | SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR01494 |
| TIGRFAMs:TIGR01512 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix | UniParc:UPI000012571A | SEG:seg | : |
Description
HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
Coordinates
chr4:-:14720062..14725311
Molecular Weight (calculated)
101995.0 Da
IEP (calculated)
6.935
GRAVY (calculated)
0.035
Length
951 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.