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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002374.1-P Field mustard plastid 91.62 91.41
CDX92394 Canola plastid 91.62 91.41
CDY16605 Canola plastid 91.51 91.3
VIT_04s0008g01960.t01 Wine grape plastid 70.89 70.5
GSMUA_Achr8P30620_001 Banana cytosol 63.99 70.27
KRH52252 Soybean plastid 70.22 68.66
Solyc08g061610.2.1 Tomato plastid 69.2 68.34
TraesCS4B01G293600.3 Wheat mitochondrion, plasma membrane 56.4 67.85
HORVU0Hr1G009080.5 Barley mitochondrion, plasma membrane 56.63 65.7
HORVU4Hr1G076330.4 Barley golgi, mitochondrion 45.87 65.22
KRH61581 Soybean plastid 36.81 64.36
TraesCS4D01G292300.2 Wheat plastid 62.85 62.43
KXG40056 Sorghum plastid 63.42 62.22
TraesCS4A01G010800.1 Wheat mitochondrion 62.51 62.02
Zm00001d027884_P003 Maize plastid 63.19 61.86
Os03t0178100-00 Rice plastid 62.63 61.31
AT4G33520.2 Thale cress plastid 39.98 37.2
AT5G44790.1 Thale cress cytosol 30.8 27.17
AT1G63440.1 Thale cress mitochondrion 30.35 26.93
AT4G30120.1 Thale cress cytosol 15.29 24.91
AT4G37270.1 Thale cress plasma membrane, plastid 19.93 21.49
AT4G30110.1 Thale cress plasma membrane 21.74 20.19
AT2G19110.2 Thale cress cytosol 22.42 16.89
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000PDB:5LBK
EntrezGene:832253ProteinID:AAO73891.1ProteinID:AED92956.1ProteinID:AED92957.1EMBL:AK316941ArrayExpress:AT5G21930
EnsemblPlantsGene:AT5G21930RefSeq:AT5G21930TAIR:AT5G21930RefSeq:AT5G21930-TAIR-GEnsemblPlants:AT5G21930.1TAIR:AT5G21930.1
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEMBL:AY297817Unigene:At.44341
UniProt:B9DFX7ProteinID:CAC34486.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004008
GO:GO:0005215GO:GO:0005375GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006811GO:GO:0006812GO:GO:0006825
GO:GO:0008150GO:GO:0009507GO:GO:0009535GO:GO:0009536GO:GO:0009579GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0035434GO:GO:0046872
GO:GO:0060003GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121InterPro:IPR023214InterPro:IPR023299RefSeq:NP_001031920.1RefSeq:NP_680181.2InterPro:P-typ_ATPase_IB
Symbol:PAA2PFAM:PF00122PFAM:PF00403PFAM:PF00702PO:PO:0000293PO:PO:0009006
PRINTS:PR00119ScanProsite:PS00154PFscan:PS50846PANTHER:PTHR43520PANTHER:PTHR43520:SF10InterPro:P_typ_ATPase
SUPFAM:SSF55008SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525TMHMM:TMhelixUniParc:UPI000034F258SEG:seg::
Description
PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
Coordinates
chr5:+:7243015..7249134
Molecular Weight (calculated)
94265.7 Da
IEP (calculated)
6.298
GRAVY (calculated)
0.157
Length
883 amino acids
Sequence
(BLAST)
001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.