CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027884_P003	Maize	plastid	95.78	95.57
TraesCS4B01G293600.3	Wheat	mitochondrion, plasma membrane	70.56	86.51
Os03t0178100-00	Rice	plastid	85.22	85.03
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	71.33	84.36
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	57.89	83.9
TraesCS4D01G292300.2	Wheat	plastid	82.67	83.69
TraesCS4A01G010800.1	Wheat	mitochondrion	82.56	83.48
GSMUA_Achr8P30620_001	Banana	cytosol	65.56	73.38
VIT_04s0008g01960.t01	Wine grape	plastid	63.44	64.3
Solyc08g061610.2.1	Tomato	plastid	63.44	63.87
CDY16605	Canola	plastid	62.67	63.73
Bra002374.1-P	Field mustard	plastid	62.56	63.62
CDX92394	Canola	plastid	62.56	63.62
AT5G21930.1	Thale cress	plastid	62.22	63.42
KRH52252	Soybean	plastid	63.0	62.79
KRH61581	Soybean	plastid	33.89	60.4
OQU81022	Sorghum	cytosol	38.0	43.46
EES04697	Sorghum	cytosol, plastid	28.56	26.39
KXG20553	Sorghum	plasma membrane	29.33	26.22
EES11247	Sorghum	mitochondrion	28.11	25.25
EES06348	Sorghum	cytosol	27.89	25.18
KXG26864	Sorghum	cytosol, plasma membrane, plastid	28.67	23.84
EER96099	Sorghum	cytosol	21.89	22.01
EER96100	Sorghum	cytosol	22.0	21.22
KXG20697	Sorghum	plastid	18.56	20.17
EER90320	Sorghum	plasma membrane	21.22	17.87

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1B6QQ54
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005375	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0006825	GO:GO:0008150
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0035434	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	InterPro:IPR023214
InterPro:IPR023299	EnsemblPlants:KXG40056	ProteinID:KXG40056	ProteinID:KXG40056.1	InterPro:P-typ_ATPase_IB	PFAM:PF00122
PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF10	InterPro:P_typ_ATPase	EnsemblPlantsGene:SORBI_3001G484400	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI00081AC4EC	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:75535617..75541897

Molecular Weight (calculated)

94406.5 Da

IEP (calculated)

5.871

GRAVY (calculated)

0.182

Length

900 amino acids

Sequence
(BLAST)

001: MATAATISLL QHVRPPASGG TSLLPLQCLR PVHCRRSAPA SHHSLQRRLR LRLPTRGAPA ARPRATADPS SALDAAAGEG TDATTALLDV SGMMCGGCAA
101: RVRAILAADP RVETAAVNLL AESAAVRLRA PAPPGAGEEL AARLTECGFP TTARRGGAAA GAGESARKWR EMAARKEELL ARSRGRVAFA WTLVALCCGS
201: HASHILHSLG IHIGHGTFLD LLHNSYVKCG IATAALLGPG RDILFDGFRA FKQGSPNMNS LVGFGSAAAF AISAVSLLNP ELEWNSTFFD EPVMLLGFVL
301: LGRSLEESAR LKASSDMNEL ISLLSPQSRL IVTSSSDDPS ADTSLNSDAI TVEVPVDDVR VGDSILVLPG ETIPVDGNVI GGSSFVDESM LTGESLPVAK
401: EIGLPVFSGT VNWDGPLKIR ATCTGPSSTI AKIVRMVEDA QAREAPVQRL ADSIAGPFVY TVMTLAAATF SFWYYIGTHV FPEVLFNDIA GPDGDSLLLS
501: IKLAVDVLVV SCPCALGLAT PTAILIGTSL GAKRGLLIRG GDVLERLAGI DALVLDKTGT LTEGKPVVTS IASLAYEDTE ILRLAAAVEK TALHPIANAI
601: MNKAELLKLD IPITSGQLTE PGFGCLAEVD GSLVAVGTLD WVHDRFETKA SPTELRDLRN RLESMLSSEA SSSNQSKSIA YVGREGEGII GAIAISDILR
701: EDANLTVERL QQESITTFLL SGDREEAVTS IGRTIGIRDE NIKSSLTPQD KASIISTLQG KGHRVAMVGD GINDAPSLAA ADVGIAMRTH SKENAASDAA
801: SVVLLGNRLS QVVDALSLSK ATMAKVHQNL AWAVAYNIVA IPIAAGVLLP QYDFAMTPSL SGGLMALSSI FVVSNSLLLQ LHGSFQNTEK RQGDLSSRLN

Best Arabidopsis Sequence Match ( AT5G21930.1 )
(BLAST)

001: MASNLLRFPL PPPSSLHIRP SKFLVNRCFP RLRRSRIRRH CSRPFFLVSN SVEISTQSFE STESSIESVK SITSDTPILL DVSGMMCGGC VARVKSVLMS
101: DDRVASAVVN MLTETAAVKF KPEVEVTADT AESLAKRLTE SGFEAKRRVS GMGVAENVKK WKEMVSKKED LLVKSRNRVA FAWTLVALCC GSHTSHILHS
201: LGIHIAHGGI WDLLHNSYVK GGLAVGALLG PGRELLFDGI KAFGKRSPNM NSLVGLGSMA AFSISLISLV NPELEWDASF FDEPVMLLGF VLLGRSLEER
301: AKLQASTDMN ELLSLISTQS RLVITSSDNN TPVDSVLSSD SICINVSVDD IRVGDSLLVL PGETFPVDGS VLAGRSVVDE SMLTGESLPV FKEEGCSVSA
401: GTINWDGPLR IKASSTGSNS TISKIVRMVE DAQGNAAPVQ RLADAIAGPF VYTIMSLSAM TFAFWYYVGS HIFPDVLLND IAGPDGDALA LSLKLAVDVL
501: VVSCPCALGL ATPTAILIGT SLGAKRGYLI RGGDVLERLA SIDCVALDKT GTLTEGRPVV SGVASLGYEE QEVLKMAAAV EKTATHPIAK AIVNEAESLN
601: LKTPETRGQL TEPGFGTLAE IDGRFVAVGS LEWVSDRFLK KNDSSDMVKL ESLLDHKLSN TSSTSRYSKT VVYVGREGEG IIGAIAISDC LRQDAEFTVA
701: RLQEKGIKTV LLSGDREGAV ATVAKNVGIK SESTNYSLSP EKKFEFISNL QSSGHRVAMV GDGINDAPSL AQADVGIALK IEAQENAASN AASVILVRNK
801: LSHVVDALSL AQATMSKVYQ NLAWAIAYNV ISIPIAAGVL LPQYDFAMTP SLSGGLMALS SIFVVSNSLL LQLHKSETSK NSL

Arabidopsis Description

PAA2Copper-transporting ATPase PAA2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFX7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.