CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 4
golgi 1
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014669_P007	Maize	plasma membrane	89.71	87.26
TraesCS7B01G320900.1	Wheat	plasma membrane	58.37	81.46
Os06t0700700-02	Rice	plasma membrane	74.93	75.07
TraesCS7A01G419500.1	Wheat	plasma membrane	68.48	74.31
TraesCS7D01G412400.1	Wheat	plasma membrane	69.69	74.28
TraesCS7D01G412800.1	Wheat	plasma membrane	65.2	73.76
HORVU7Hr1G097240.1	Barley	plasma membrane	69.5	73.64
TraesCS7A01G420000.1	Wheat	plasma membrane	64.64	73.59
TraesCS7B01G320100.2	Wheat	plasma membrane	70.35	73.51
HORVU7Hr1G097210.4	Barley	plasma membrane	63.52	71.78
GSMUA_Achr5P22660_001	Banana	plasma membrane	47.43	62.06
VIT_11s0103g00370.t01	Wine grape	plasma membrane	41.35	61.56
CDY51647	Canola	golgi, plasma membrane, vacuole	19.64	60.69
AT4G30120.1	Thale cress	cytosol	29.84	58.86
CDY28160	Canola	cytosol	40.41	56.99
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	49.77	56.9
Bra011165.1-P	Field mustard	cytosol	40.22	56.73
CDX68627	Canola	cytosol, plasma membrane, vacuole	40.13	56.6
GSMUA_Achr8P24660_001	Banana	cytosol	49.77	56.54
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	40.13	56.15
CDY69827	Canola	plasma membrane	33.02	56.03
KRH02816	Soybean	plasma membrane	38.26	54.68
EER96099	Sorghum	cytosol	45.09	53.85
CDY69511	Canola	plasma membrane	35.64	53.21
CDY72630	Canola	golgi, plasma membrane, vacuole	17.31	53.16
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.42	52.63
Bra011164.1-P	Field mustard	cytosol, plasma membrane	42.84	52.52
EER96100	Sorghum	cytosol	45.74	52.41
CDY62400	Canola	plasma membrane	42.28	51.83
CDY30170	Canola	cytosol, peroxisome, plasma membrane	42.38	51.77
CDX68625	Canola	plasma membrane	35.08	51.37
CDY51646	Canola	cytosol, plasma membrane, vacuole	9.35	51.28
AT4G30110.1	Thale cress	plasma membrane	44.34	49.84
Bra024107.1-P	Field mustard	plasma membrane	40.41	48.92
CDY28206	Canola	plasma membrane	31.52	46.74
KRH37273	Soybean	cytosol, plasma membrane, vacuole	38.45	46.44
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.29	45.6
KRH19069	Soybean	plasma membrane	46.02	44.89
CDY51090	Canola	cytosol	42.56	41.82
CDY36489	Canola	cytosol	43.69	40.64
AT2G19110.2	Thale cress	cytosol	43.78	39.93
Bra024449.1-P	Field mustard	cytosol	42.94	38.57
Solyc07g009130.2.1	Tomato	plastid	44.9	36.87
Bra038842.1-P	Field mustard	cytosol	43.31	36.43
CDY08717	Canola	cytosol, nucleus, plasma membrane	43.97	30.15
OQU81022	Sorghum	cytosol	17.87	24.27
EES04697	Sorghum	cytosol, plastid	19.74	21.66
KXG20553	Sorghum	plasma membrane	20.11	21.35
KXG40056	Sorghum	plastid	17.87	21.22
EES06348	Sorghum	cytosol	19.64	21.06
KXG20697	Sorghum	plastid	16.28	21.01
EES11247	Sorghum	mitochondrion	18.71	19.96
KXG26864	Sorghum	cytosol, plasma membrane, plastid	18.71	18.48
CDY51648	Canola	cytosol	0.84	13.24

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:8065564
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	UniProt:C5Z8W8	ncoils:Coil
EnsemblPlants:EER90320	ProteinID:EER90320	ProteinID:EER90320.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119
ScanProsite:PS00154	ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase
EnsemblPlantsGene:SORBI_3010G250900	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	unigene:Sbi.10949
unigene:Sbi.12012	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0001A89776
RefSeq:XP_002438953.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:58983188..58990737

Molecular Weight (calculated)

115003.0 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.188

Length

1069 amino acids

Sequence
(BLAST)

0001: MGDAAVPAGT LQKSYFDVLG ICCPSEVPLV EKLLRPLPGV HTVTVIVPSR TVIVLHDAAA TSPAQIVKAL NQARLEASVR AYGSGSEEKV ANKWPSPYVL
0101: FCGVFLVVSL FEHFWPPLKW FALVAAAAGL PPIVLRSFAA ARRLTLDVNI LMLIAVSGAI ALKDYSEAGF IVFLFTTAEW LETRASHKAT AGMSSLMSMT
0201: PQKAVLAETG EVVSAQDVKV NTVIAVKAGE VVPIDGVVVD GRSEVDESTL TGESFPVAKQ PDSQVWAGTL NIDGYIAVRT TAMADNSAVA KMARLVEEAQ
0301: NSRSKTQRLI DTCAKYYTPA VVVMAAGVAV IPVAIRAHHL KHWFQLALVL LVSACPCALV LSTPVATFCA LLTAARTGLL IKGGDVLETL ARIKIAAFDK
0401: TGTITRGEFC VEEFQAVGER IPMQQLLYWV SSIESRSSHP MASVLVDYAL SKSVEPKSDN VTEFQIYPGE GIYGEIDGEG VYIGNKRILS RASCETVPDM
0501: KDMKGVTIGY VACKGQLIGV FTLSDSCRTG SAEAIRELRS LGIKSVMLTG DSSAAASYAQ NQLGNILDEV HPELLPEDKV RIVDELKAKH GPTLMIGDGM
0601: NDAPALAKAD VGVSMGVSGS AVAMETSHIT LMSNDIRRIP KAIQLARRTH RTIIVNIIFS VITKLAIVGL ALSGHPLIWA AVLADVGTCM LVIMYSMLLL
0701: RSKGGRKAKK CCASSQHGSH AKKHCVSRHC SDGPCKSTGC SKESSAGKHG CHDHGHAHTH CKEPSSQHPT EKHACHDHGH SHNHCKEPSS HVVTEKHVCH
0801: DHGNTHNHCK EAGNQLLLVE GHGCHDRDHG HSHEHTGKQD CHGHEHSHCK EPKTPRADSE GACHGHGHDH GHEHRHCEGD SHSHATGELG CHEHSTVEHA
0901: CEHQCHAEQQ TVHTAETHHC HDHEHGQHKH DHGEIEEPEK DCHDHSHHCC HEPHDKDKTP AEPVEEVTIS IAALPKDEGH HHSEEHKGEH CGKAKDCGVP
1001: APTDCAASKN CCSVKGGDTC SSSQAACAKE TSPCCRSYVK CPKTTATVTR SSCCGHSHTM LKLPEIVVE

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.