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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011165.1-P Field mustard cytosol 99.34 99.34
CDX68627 Canola cytosol, plasma membrane, vacuole 96.83 96.83
AT4G30120.1 Thale cress cytosol 63.32 88.56
CDY51647 Canola golgi, plasma membrane, vacuole 40.24 88.15
CDY51646 Canola cytosol, plasma membrane, vacuole 21.9 85.13
CDY72630 Canola golgi, plasma membrane, vacuole 38.52 83.91
CDY51690 Canola cytosol, plasma membrane, vacuole 18.34 81.29
CDY51648 Canola cytosol 6.2 69.12
CDY69827 Canola plasma membrane 52.77 63.49
VIT_11s0103g00370.t01 Wine grape plasma membrane 59.37 62.67
CDY62400 Canola plasma membrane 68.87 59.86
CDY30170 Canola cytosol, peroxisome, plasma membrane 68.73 59.54
CDY69511 Canola plasma membrane 54.09 57.26
CDX68625 Canola plasma membrane 54.22 56.3
KRH02816 Soybean plasma membrane 55.28 56.02
TraesCS7B01G320900.1 Wheat plasma membrane 55.01 54.44
CDY28206 Canola plasma membrane 50.13 52.7
GSMUA_Achr5P22660_001 Banana plasma membrane 56.07 52.02
HORVU5Hr1G094430.8 Barley endoplasmic reticulum, plasma membrane 49.47 49.02
CDX68623 Canola cytosol, endoplasmic reticulum, plasma membrane 34.96 48.53
TraesCS5A01G383400.1 Wheat plasma membrane 50.0 46.45
TraesCS5B01G388000.1 Wheat plasma membrane 50.53 46.2
CDY51090 Canola cytosol 66.23 46.14
TraesCS5D01G392700.1 Wheat plasma membrane 50.4 44.78
TraesCS7A01G420000.1 Wheat plasma membrane 55.15 44.52
CDY36489 Canola cytosol 66.75 44.04
TraesCS7D01G412800.1 Wheat plasma membrane 54.75 43.92
GSMUA_Achr5P21940_001 Banana extracellular, plasma membrane 53.56 43.42
GSMUA_Achr8P24660_001 Banana cytosol 53.69 43.25
HORVU7Hr1G097210.4 Barley plasma membrane 53.96 43.23
TraesCS7A01G419500.1 Wheat plasma membrane 55.8 42.94
TraesCS7D01G412400.1 Wheat plasma membrane 56.33 42.57
KRH19069 Soybean plasma membrane 61.21 42.34
HORVU7Hr1G097240.1 Barley plasma membrane 55.8 41.92
TraesCS7B01G320100.2 Wheat plasma membrane 56.07 41.54
Zm00001d005190_P001 Maize plastid 49.21 41.54
EER96099 Sorghum cytosol 48.94 41.45
EER90320 Sorghum plasma membrane 56.99 40.41
Os06t0700700-02 Rice plasma membrane 56.86 40.39
EER96100 Sorghum cytosol 49.34 40.09
Zm00001d005189_P001 Maize plasma membrane 49.08 38.59
Os07t0232900-01 Rice cytosol, nucleus, plasma membrane 50.92 38.45
Zm00001d014669_P007 Maize plasma membrane 55.67 38.4
Solyc07g009130.2.1 Tomato plastid 59.23 34.49
CDY08717 Canola cytosol, nucleus, plasma membrane 67.81 32.97
CDY26408 Canola golgi, nucleus, plasma membrane 7.52 32.95
Zm00001d019226_P003 Maize cytosol 35.75 30.35
CDY67984 Canola cytosol, peroxisome, plasma membrane 8.18 25.31
CDY67922 Canola cytosol 7.78 24.79
CDY67923 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 5.28 23.95
CDX91834 Canola cytosol, peroxisome, plasma membrane 24.14 21.33
CDY16605 Canola plastid 24.54 21.02
CDX92394 Canola plastid 24.54 21.02
CDY50771 Canola cytosol 27.31 20.82
CDY39400 Canola cytosol 27.44 20.82
CDX75636 Canola mitochondrion 22.43 20.81
CDX69288 Canola plastid 22.3 20.63
CDY50396 Canola cytosol 24.27 18.91
CDY49160 Canola cytosol 24.27 18.91
CDX75363 Canola plastid 23.22 18.78
CDY46080 Canola plastid 16.49 18.52
CDX68986 Canola plastid 22.69 18.38
CDY34353 Canola mitochondrion 24.67 18.12
CDY25498 Canola mitochondrion 24.54 17.99
CDX93870 Canola endoplasmic reticulum, plasma membrane 17.15 17.81
CDY69037 Canola cytosol 12.01 15.58
CDY67659 Canola cytosol 11.87 15.13
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078GNQ0
UniProt:A0A078GNQ0InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY28160
ProteinID:CDY28160ProteinID:CDY28160.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00039868001InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
InterPro:IPR023214InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00702PRINTS:PR00119
PRINTS:PR00120ScanProsite:PS00154ScanProsite:PS01229PFscan:PS50846PANTHER:PTHR43338InterPro:P_typ_ATPase
SUPFAM:SSF55008SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01512
TIGRFAMs:TIGR01525TMHMM:TMhelixUniParc:UPI0004EEA9B5SEG:seg::
Description
BnaA01g06890DBnaA01g06890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNQ0]
Coordinates
chrLK032216:-:4025..7180
Molecular Weight (calculated)
81364.1 Da
IEP (calculated)
6.301
GRAVY (calculated)
0.263
Length
758 amino acids
Sequence
(BLAST)
001: MADGEDTTKK NLQTSYFDVV GICCSMEVPL VGDVLRPLNG VKEFSVIVPS RTVIVVHDSF LISPLQIVKA LNEARLEASV RPYGETSFKS QWPSPFALVS
101: GVLLALSFLK YFYGLLEWFA VVAVVAGVYP ILAKAVASVT RFRLDINALT LIAVIATVCM EDYTEAATIV FLFSVADWLE SSAAHKASTV MSSLMSLAPR
201: KAVIAETGIA VDVDEVGLNT VVSVKAGESI PIDGVVVDGS CDVDEKTLTG ESFPVSKQRD SHVLAATINL NGYIKVKTTV LARDCVVAKM TKLVEEAQKS
301: QTKTQRFIDK CSRYYTPAVV VVAACFALIP VLLKAQNLSH WFHLALVVLV SGCPCGLILS TPVATFCALT KAATSGFLIK TGDCLETLAK IKIAAFDKTG
401: TITKAEFTVS DFQSLSHNIN LQHLIYWVSS IESKSSHPMA EALIDYARSV SVEPKPDMVE NFQNFPGEGV YGRIDGQDIY IGNKRIAKRA GCLTVPDSEA
501: DMKGGKTIGY IYIGEELTGS FSLLDGCRHG VAQALKELKF LGIATAMLTG DNRDAAMSIQ QQLGNALDIA HTELLPQDKA RIIDEFKSQG PTMMVGDGLN
601: DAPALAKADI GISMGISGSA LATETGDIIL MSNDLRKIPK GMRLARRCHK KVIENVVLSV SIKGAIMVLG FAGYPLIWAA VLADAGTCLL VILNSMMLLR
701: DEREAVSACY RASPSSCTPS LLKLEEDLEV GLLQKSEETS NKSCCSGCCG GPKGTQQK
Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)
0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA
Arabidopsis Description
HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.