Factsheet for GSMUA_Achr5P21940_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22660_001	Banana	plasma membrane	59.57	68.18
GSMUA_Achr8P24660_001	Banana	cytosol	64.06	63.66
TraesCS7B01G320900.1	Wheat	plasma membrane	51.34	62.66
VIT_11s0103g00370.t01	Wine grape	plasma membrane	46.74	60.86
CDY51647	Canola	golgi, plasma membrane, vacuole	22.03	59.54
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	47.38	57.91
AT4G30120.1	Thale cress	cytosol	33.16	57.2
TraesCS7A01G420000.1	Wheat	plasma membrane	54.55	54.31
TraesCS5A01G383400.1	Wheat	plasma membrane	47.38	54.29
TraesCS7D01G412800.1	Wheat	plasma membrane	54.87	54.29
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	44.06	53.93
HORVU7Hr1G097210.4	Barley	plasma membrane	54.22	53.59
Bra011165.1-P	Field mustard	cytosol	43.42	53.56
CDY28160	Canola	cytosol	43.42	53.56
TraesCS5B01G388000.1	Wheat	plasma membrane	47.17	53.2
CDX68627	Canola	cytosol, plasma membrane, vacuole	43.1	53.17
CDY69827	Canola	plasma membrane	35.72	53.02
KRH02816	Soybean	plasma membrane	41.93	52.41
TraesCS5D01G392700.1	Wheat	plasma membrane	47.38	51.93
TraesCS7D01G412400.1	Wheat	plasma membrane	55.51	51.74
Os06t0700700-02	Rice	plasma membrane	58.72	51.45
TraesCS7A01G419500.1	Wheat	plasma membrane	53.69	50.96
HORVU7Hr1G097240.1	Barley	plasma membrane	54.87	50.84
TraesCS7B01G320100.2	Wheat	plasma membrane	55.51	50.73
Bra011164.1-P	Field mustard	cytosol, plasma membrane	47.06	50.46
CDY30170	Canola	cytosol, peroxisome, plasma membrane	47.06	50.29
CDY72630	Canola	golgi, plasma membrane, vacuole	18.61	50.0
CDY62400	Canola	plasma membrane	46.52	49.89
EER90320	Sorghum	plasma membrane	56.9	49.77
Zm00001d005190_P001	Maize	plastid	47.49	49.44
EER96099	Sorghum	cytosol	47.17	49.27
CDY69511	Canola	plasma membrane	37.65	49.16
CDY51646	Canola	cytosol, plasma membrane, vacuole	10.16	48.72
Bra024107.1-P	Field mustard	plasma membrane	45.88	48.58
Zm00001d014669_P007	Maize	plasma membrane	56.26	47.86
CDX68625	Canola	plasma membrane	37.22	47.67
EER96100	Sorghum	cytosol	47.27	47.37
KRH37273	Soybean	cytosol, plasma membrane, vacuole	44.81	47.34
CDY51690	Canola	cytosol, plasma membrane, vacuole	8.56	46.78
AT4G30110.1	Thale cress	plasma membrane	47.49	46.69
Zm00001d005189_P001	Maize	plasma membrane	47.06	45.64
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	48.02	44.72
CDY28206	Canola	plasma membrane	34.12	44.24
GSMUA_Achr4P30180_001	Banana	plasma membrane	36.15	44.24
KRH19069	Soybean	plasma membrane	50.16	42.79
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	23.53	40.29
CDY51090	Canola	cytosol	46.52	39.98
CDY36489	Canola	cytosol	47.81	38.9
AT2G19110.2	Thale cress	cytosol	46.31	36.95
Bra024449.1-P	Field mustard	cytosol	46.52	36.55
Zm00001d019226_P003	Maize	cytosol	33.8	35.39
Solyc07g009130.2.1	Tomato	plastid	48.77	35.02
Bra038842.1-P	Field mustard	cytosol	47.17	34.7
CDY08717	Canola	cytosol, nucleus, plasma membrane	48.24	28.93
GSMUA_Achr5P12290_001	Banana	plasma membrane	16.58	27.68
GSMUA_Achr8P30620_001	Banana	cytosol	21.18	24.63
GSMUA_Achr8P06970_001	Banana	cytosol	23.21	22.99
GSMUA_Achr7P12640_001	Banana	cytosol	20.11	22.52
GSMUA_Achr5P26800_001	Banana	cytosol	22.46	22.44
GSMUA_Achr3P11880_001	Banana	cytosol	20.53	21.22
GSMUA_Achr5P12300_001	Banana	cytosol	17.33	20.33
GSMUA_Achr9P16140_001	Banana	plastid	17.86	19.4
GSMUA_Achr1P00300_001	Banana	cytosol	18.07	19.23
CDY51648	Canola	cytosol	0.86	11.76

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872
GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr5G21940_001	EnsemblPlants:GSMUA_Achr5P21940_001	EnsemblPlants:GSMUA_Achr5T21940_001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0T0L9
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154	ScanProsite:PS01229
PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	SignalP:SignalP-noTM	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525
TMHMM:TMhelix	UniParc:UPI00029508A1	SEG:seg	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G21940_001]

Coordinates

chr5:-:24075435..24081201

Molecular Weight (calculated)

101528.0 Da

IEP (calculated)

7.883

GRAVY (calculated)

0.124

Length

935 amino acids

Sequence
(BLAST)

001: MHQFIILFLY LLAFFFFPLK HTVSIRNVDV SVKRKILEME EHGSPKRSKE VRHQKSYFEV LGLCCPSEVP LIENILSSLD GIQKVSVIVP SKMVIVIHDS
101: LIISQLQIVK ALNQARLEAT VRAYGTDAIV KKWPSPYILA SGLLLSASMF KHFFHPLKWL AIAAVVAGLP PIVLRSIAAI RTCTLDTNIL LLVAVGGAVA
201: LEDYTEAGFI VLLFAVAEWL ESISSLKATV GMSTLMRMAP QNAILAETGE VVDAQDVKIN TILAVKAGEV IPIDGVVVEG QSEVDESSLT GESFPVVKQP
301: QSPVWAGTLN IDGYISVRTT ALAEQSAVAR MARLVEEAQN RRSKTQTLID SCAKYYTPAV VTIAAGVAVV PMLMRVNDTK RWFRLALVLL VSACPCALVL
401: STPVATFCAL LRAARAGLFI KGGDVLENLA GITVVAFDKT GTLTKGEFTV MDFRSISSNV SLHTLLYWVS SIESKSSHPM ASALVDYAKS NSIKPKPENV
501: REFHIYPGEG IHGEIDGKNI YIGNKRIASR AACKTVPNVE GMEGINYGYI FLDMIPIGIF TLSDTCRAGA AQALKALKSL GIKCAMITGD SNEAAIHAQN
601: QLGHAIEIIH AELLPEDKVR IIGDLKAGEG SIAMIGDGMN DAPSLAMADV GISMGISGSA VAKETSHITL MSNDISKVPK AIRLARKTYF TIIQNIFFSV
701: ITKVVVLAFA FAGHPLLWAA VLADVGTCLL VILNSMMLLQ SKDKNKKHCA RHEHKLPGSH EQSQSCKHGH SCHEHEKGDK EKTHENCMNQ DSQIESSIAS
801: HCCHESVADK ANATQEHSIL ITDGKVQHGD GLLKENTSKN VACSHKPDIR ENCCERHVIC SSSKFCRGTD KEKHGDCCIT HRHVCGKEQQ GCSSSQGIIE
901: RRMIGGCCNS YRKRCGKKDS CCANGNVLLP EIILE

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.