Factsheet for GSMUA_Achr4P30180_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22660_001	Banana	plasma membrane	44.37	41.49
GSMUA_Achr8P24660_001	Banana	cytosol	44.63	36.24
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	44.24	36.15
GSMUA_Achr5P12290_001	Banana	plasma membrane	20.29	27.68
GSMUA_Achr8P30620_001	Banana	cytosol	25.26	24.0
GSMUA_Achr7P12640_001	Banana	cytosol	25.13	22.99
GSMUA_Achr5P26800_001	Banana	cytosol	27.36	22.33
GSMUA_Achr8P06970_001	Banana	cytosol	27.36	22.14
GSMUA_Achr3P11880_001	Banana	cytosol	24.61	20.77
GSMUA_Achr9P16140_001	Banana	plastid	22.77	20.21
GSMUA_Achr5P12300_001	Banana	cytosol	21.07	20.2
GSMUA_Achr1P00300_001	Banana	cytosol	21.2	18.43

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872
GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr4G30180_001	EnsemblPlants:GSMUA_Achr4P30180_001	EnsemblPlants:GSMUA_Achr4T30180_001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0STD0
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002966A58
SEG:seg	:	:	:	:	:

Description

Putative cadmium/zinc-transporting ATPase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G30180_001]

Coordinates

chr4:+:27876802..27879886

Molecular Weight (calculated)

82259.0 Da

IEP (calculated)

5.593

GRAVY (calculated)

0.251

Length

764 amino acids

Sequence
(BLAST)

001: MADAMEARPP SAVQKTTFTV LGICCSSEIK LIDRILNHLE GIENVSVNVL AKTATVVHDP AKAPASRIVS ALNGAHLNAG IKESGRVQIE SRPWPSKSVV
101: ASGALLLVAL CSYVFPPLIW IALLSVTVGV LDMLRRAVAA LRRCVLDINV LMVTAVFGAI GLGDYLEAAS IVFLFTLAEW LEAKSTNKAR VSLESLLNLA
201: PQTAVIAETG ETVHVKDIMI NTIVSVKAGE LVPVDGAVVA GASTVDESSL TGEFMPVDKE IGSNVWSGTT VLTGFIKVVT MAVAEDSAVA RMVKLVEDAQ
301: NRRSNMEEFI EQFAKYYTPD SDSYGIMTIR VFLVAAGTAI IPWILGVHPL RQWIYLALVL LVIACPCALV ISTPVAKACG LSAAAKMGLI FKGGNYLEAL
401: AKVKAMAFDK TGTLTEGAFE VVEVQCWEPN ANIRQFLHWI SSLENMSSHP MARALVEYAR VRGVKPSSEV RNFNLIPGGI AGFVDDCYVK IGNAEVALSN
501: GWLRENELRD NEAGITISYV GMVDRCIGYF CLGDQLREEA ARAVQKLKKQ QIHVIVLTGD SRAAAEHVQK QIGENVQVEA GLSPEGKMKK IAELKETWGL
601: TAMVGDGIND APALTESDVG VAMGISGSAL ATETANVALM SNDLRRIPEA VELARSSLRK IYQNVAMSLA VKLLFFGLAF GGLPSLWAAV VADMGTCLLV
701: IFNSMHLLHK YGGRESSTCS SQVPQEQSIN VDEFSEPLLS SERRDQDEEA PCLCCKGRSS QRER

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.