Factsheet for GSMUA_Achr5P22660_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P24660_001	Banana	cytosol	76.74	66.63
TraesCS7B01G320900.1	Wheat	plasma membrane	60.34	64.36
VIT_11s0103g00370.t01	Wine grape	plasma membrane	54.59	62.12
CDY51647	Canola	golgi, plasma membrane, vacuole	25.58	60.4
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	68.18	59.57
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	54.22	57.91
AT4G30120.1	Thale cress	cytosol	38.19	57.56
CDY28160	Canola	cytosol	52.02	56.07
Bra011165.1-P	Field mustard	cytosol	51.77	55.8
CDX68627	Canola	cytosol, plasma membrane, vacuole	51.65	55.67
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	51.77	55.37
TraesCS7A01G420000.1	Wheat	plasma membrane	63.04	54.85
TraesCS5A01G383400.1	Wheat	plasma membrane	54.71	54.78
KRH02816	Soybean	plasma membrane	50.06	54.68
TraesCS5B01G388000.1	Wheat	plasma membrane	55.45	54.64
TraesCS7D01G412800.1	Wheat	plasma membrane	62.91	54.39
CDY72630	Canola	golgi, plasma membrane, vacuole	22.77	53.45
HORVU7Hr1G097210.4	Barley	plasma membrane	61.69	53.28
CDY69827	Canola	plasma membrane	40.88	53.02
TraesCS5D01G392700.1	Wheat	plasma membrane	54.96	52.64
CDY30170	Canola	cytosol, peroxisome, plasma membrane	55.08	51.43
CDY51646	Canola	cytosol, plasma membrane, vacuole	12.24	51.28
Bra011164.1-P	Field mustard	cytosol, plasma membrane	54.59	51.15
TraesCS7D01G412400.1	Wheat	plasma membrane	62.79	51.15
CDY62400	Canola	plasma membrane	54.47	51.03
TraesCS7A01G419500.1	Wheat	plasma membrane	61.08	50.66
HORVU7Hr1G097240.1	Barley	plasma membrane	62.3	50.45
CDY51690	Canola	cytosol, plasma membrane, vacuole	10.53	50.29
TraesCS7B01G320100.2	Wheat	plasma membrane	62.79	50.15
CDY69511	Canola	plasma membrane	43.7	49.86
Zm00001d005190_P001	Maize	plastid	53.98	49.11
Os06t0700700-02	Rice	plasma membrane	63.53	48.64
CDX68625	Canola	plasma membrane	43.33	48.49
EER96099	Sorghum	cytosol	53.0	48.38
Bra024107.1-P	Field mustard	plasma membrane	52.14	48.24
EER90320	Sorghum	plasma membrane	62.06	47.43
EER96100	Sorghum	cytosol	53.86	47.16
AT4G30110.1	Thale cress	plasma membrane	54.22	46.58
KRH37273	Soybean	cytosol, plasma membrane, vacuole	49.82	45.99
Zm00001d005189_P001	Maize	plasma membrane	54.22	45.95
Zm00001d014669_P007	Maize	plasma membrane	61.57	45.77
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	54.83	44.62
CDY28206	Canola	plasma membrane	39.29	44.52
GSMUA_Achr4P30180_001	Banana	plasma membrane	41.49	44.37
KRH19069	Soybean	plasma membrane	58.38	43.52
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	28.4	42.49
CDY51090	Canola	cytosol	52.63	39.52
CDY36489	Canola	cytosol	55.32	39.34
AT2G19110.2	Thale cress	cytosol	53.61	37.37
Bra024449.1-P	Field mustard	cytosol	53.61	36.81
Zm00001d019226_P003	Maize	cytosol	37.94	34.71
Solyc07g009130.2.1	Tomato	plastid	54.83	34.41
Bra038842.1-P	Field mustard	cytosol	52.63	33.83
CDY08717	Canola	cytosol, nucleus, plasma membrane	55.32	28.99
GSMUA_Achr5P12290_001	Banana	plasma membrane	18.97	27.68
GSMUA_Achr8P30620_001	Banana	cytosol	23.62	24.0
GSMUA_Achr7P12640_001	Banana	cytosol	23.62	23.11
GSMUA_Achr8P06970_001	Banana	cytosol	25.95	22.46
GSMUA_Achr3P11880_001	Banana	cytosol	24.36	21.99
GSMUA_Achr5P26800_001	Banana	cytosol	25.09	21.9
GSMUA_Achr9P16140_001	Banana	plastid	21.3	20.21
GSMUA_Achr5P12300_001	Banana	cytosol	19.46	19.95
GSMUA_Achr1P00300_001	Banana	cytosol	20.44	19.0
CDY51648	Canola	cytosol	0.73	8.82

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001
GO:GO:0046872	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr5G22660_001	EnsemblPlants:GSMUA_Achr5P22660_001	EnsemblPlants:GSMUA_Achr5T22660_001	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
UniProt:M0T0U1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0002956A25	SEG:seg	:	:	:	:

Description

Putative cadmium/zinc-transporting ATPase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22660_001]

Coordinates

chr5:+:24626825..24632054

Molecular Weight (calculated)

87875.9 Da

IEP (calculated)

7.601

GRAVY (calculated)

0.180

Length

817 amino acids

Sequence
(BLAST)

001: MGEVGNDRKA KAAKNQKSYF DVLGLCCSSE VPLIEKILKP LDGVQKVSVI VPSKTVIVIH DSLLISQHEI AKALNQARLE ASVRAYGTAK STKKWPSLYI
101: LACGVLLLVS LFKKFFHPLQ WFAIAAVLVG IPPIMLRSIA AIRKLTLDIN ILLLIAVGGA VAFRDYSEAA FIVLLFTVAE WLESKASSKA TAGMSSLMSM
201: APQQAVLAET GQVVDVEDVE INTLIAVKAG EVIPIDGIVI DGWSEVDERS LTGESFPVAK QANSLVWAGT LSIDGYVSVR TTSLSENSAV AKMTSLVEEA
301: QSSRSRTQRL IDSCTKYYTP AVVIVAAGVA LIPFLMRASN PRSWFQLALV LCVSACPCAL VLSTPVATFC ALLKAARTGL LIKGGDVLEA LAKIRVVAFD
401: KTGTITKGEF TVVEFESMSG KVNLHTLLYW VSSIESKSSH PMAYALVDHA RSYSIEPKPE SVKEFRIYPG EGIYGEIEGR NIYIGNKRIA ARASSETVPN
501: MADMKGGVTY GYVFLDMIQV GTFALSDTCR TGAAEANKEL KLLGIKTAML TGDSTEAAMH AHGQIEHGME IIHAELLPED KVHLIDSLKK REGPTAMVGD
601: GVNDAPALAM ASIGISMGVS GSAVAVETSH ITLMSNDLRK IPKAIRLARK TRFKIVANIV FSLATKIAIL AMAVAGHPLL WAAVLADVGT CLLVIFNSMT
701: LLQTSKPSQA KCCSSSHNRL KERRLQSPSF QDEHCCHDHK KAIAVTDANH TSDGCCMANG DDFGRERGCS SAEETTGRRE IGGCCRSHTD GYCAGESAVV
801: QMPEIITEWE REKTAAT

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.