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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30170 Canola cytosol, peroxisome, plasma membrane 95.64 95.31
CDY69511 Canola plasma membrane 69.84 85.06
CDX68625 Canola plasma membrane 70.53 84.25
CDY28206 Canola plasma membrane 66.17 80.03
AT4G30110.1 Thale cress plasma membrane 83.94 76.97
CDY69827 Canola plasma membrane 55.28 76.51
CDX68623 Canola cytosol, endoplasmic reticulum, plasma membrane 47.82 76.37
CDX68627 Canola cytosol, plasma membrane, vacuole 60.21 69.26
CDY51647 Canola golgi, plasma membrane, vacuole 27.41 69.08
CDY28160 Canola cytosol 59.86 68.87
VIT_11s0103g00370.t01 Wine grape plasma membrane 55.39 67.27
CDY72630 Canola golgi, plasma membrane, vacuole 25.57 64.08
CDY51690 Canola cytosol, plasma membrane, vacuole 12.04 61.4
CDY51646 Canola cytosol, plasma membrane, vacuole 13.65 61.03
KRH02816 Soybean plasma membrane 51.61 60.16
CDY51090 Canola cytosol 73.51 58.92
TraesCS7B01G320900.1 Wheat plasma membrane 49.89 56.79
CDY36489 Canola cytosol 74.77 56.74
GSMUA_Achr5P22660_001 Banana plasma membrane 51.03 54.47
HORVU5Hr1G094430.8 Barley endoplasmic reticulum, plasma membrane 44.38 50.59
TraesCS7A01G420000.1 Wheat plasma membrane 51.72 48.03
TraesCS7D01G412800.1 Wheat plasma membrane 51.49 47.51
TraesCS5B01G388000.1 Wheat plasma membrane 45.07 47.41
GSMUA_Achr8P24660_001 Banana cytosol 51.03 47.29
KRH19069 Soybean plasma membrane 59.4 47.26
TraesCS5A01G383400.1 Wheat plasma membrane 44.15 47.18
HORVU7Hr1G097210.4 Barley plasma membrane 50.69 46.72
GSMUA_Achr5P21940_001 Banana extracellular, plasma membrane 49.89 46.52
TraesCS5D01G392700.1 Wheat plasma membrane 44.72 45.72
TraesCS7A01G419500.1 Wheat plasma membrane 51.49 45.58
TraesCS7D01G412400.1 Wheat plasma membrane 52.41 45.56
HORVU7Hr1G097240.1 Barley plasma membrane 52.41 45.29
TraesCS7B01G320100.2 Wheat plasma membrane 51.95 44.28
Os06t0700700-02 Rice plasma membrane 52.75 43.11
EER96099 Sorghum cytosol 44.04 42.91
Zm00001d005190_P001 Maize plastid 44.15 42.87
EER90320 Sorghum plasma membrane 51.83 42.28
EER96100 Sorghum cytosol 44.95 42.02
CDY08717 Canola cytosol, nucleus, plasma membrane 75.0 41.95
Zm00001d005189_P001 Maize plasma membrane 45.18 40.87
Zm00001d014669_P007 Maize plasma membrane 51.26 40.67
Os07t0232900-01 Rice cytosol, nucleus, plasma membrane 45.99 39.94
CDY51648 Canola cytosol 3.1 39.71
Solyc07g009130.2.1 Tomato plastid 56.65 37.94
Zm00001d019226_P003 Maize cytosol 34.06 33.26
CDY26408 Canola golgi, nucleus, plasma membrane 6.42 32.37
CDY67922 Canola cytosol 7.57 27.73
CDY67923 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 4.93 25.75
CDY67984 Canola cytosol, peroxisome, plasma membrane 7.22 25.71
CDX91834 Canola cytosol, peroxisome, plasma membrane 23.74 24.13
CDY16605 Canola plastid 22.36 22.03
CDX92394 Canola plastid 22.36 22.03
CDX75636 Canola mitochondrion 20.3 21.66
CDX69288 Canola plastid 20.18 21.49
CDY50771 Canola cytosol 24.31 21.33
CDY39400 Canola cytosol 24.43 21.32
CDX93870 Canola endoplasmic reticulum, plasma membrane 17.32 20.68
CDY50396 Canola cytosol 22.82 20.45
CDY49160 Canola cytosol 22.48 20.14
CDX75363 Canola plastid 21.56 20.06
CDY34353 Canola mitochondrion 23.62 19.96
CDX68986 Canola plastid 21.22 19.77
CDY25498 Canola mitochondrion 23.39 19.73
CDY46080 Canola plastid 15.25 19.7
CDY69037 Canola cytosol 10.55 15.75
CDY67659 Canola cytosol 10.32 15.13
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078JDA8
UniProt:A0A078JDA8InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY62400
ProteinID:CDY62400ProteinID:CDY62400.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872GO:GO:0099132
EnsemblPlantsGene:GSBRNA2T00036232001InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sfInterPro:IPR006121
InterPro:IPR023214InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00702PRINTS:PR00119
ScanProsite:PS00154PFscan:PS50846PANTHER:PTHR43338InterPro:P_typ_ATPaseSUPFAM:SSF55008SUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01512TIGRFAMs:TIGR01525TMHMM:TMhelix
UniParc:UPI0004EEA208SEG:seg::::
Description
BnaC07g50890DBnaC07g50890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDA8]
Coordinates
chrLK034138:+:24433..29116
Molecular Weight (calculated)
94288.2 Da
IEP (calculated)
7.749
GRAVY (calculated)
0.013
Length
872 amino acids
Sequence
(BLAST)
001: MTFKNEKKMT KSYFDVLGIC CTSEVPLIEN ILKSLDGIKE YSVIVPSRTV IVVHDSLIIS QFHIVKALNQ ARLEANVRVT GETSFKNKWP SPFAVVSGVL
101: LLLSFFKYLY SPFRWLAVAA VVAGIYPILA KSVASIARTR IDINVLVVIT VGATLGIQDY TEAAAVVFLF TIAEWLQSRA SYKASAVMQS LMSLAPQKAV
201: IAETGEEVEV DELKINTVIA VKTGETIPID GVVVDGNCEV DEKTLTGEAF PVPKLRDSTV WAGTINLNGY ITVKTTSLAE DCVVAKMAKL VEEAQNSKTE
301: TQRFIDQCSK YYTPAIIIIS LSFVVIPFAL KAHNMKHWLH LALVVLVSAC PCGLILSTPV ATFCALTKAA TSGLLIKGAD YLETLAKIKT VAFDKTGTIT
401: RGEFIVIDFK SLSRDISLHR LLYWVSSVES KSSHPMAAAL VDYAKSVYVE PKPEAVEDYQ NFPGEGIYGK IDDKEVYIGN KRIASRAGCS SVPDTDVDTK
501: GGKTVGYVYV GETLAGSFNL SDACRSGVAQ AMKELKSLGI KTAMLTGDNQ AAAMHAQEQL GNAIDIIHAE LLPEGKSEII KEFKREGPTA MVGDGLNDAP
601: ALATADIGIS MGVSGSALAT ETGNIILMSN DIRRIPQGIR LARRAKRKVV ENVVLSITMK GAILGLAFAG YPLIWAAVLA DVGTCLLVIL NSMLLLRDKQ
701: KGGNKCYRSS SPPCVLNGEK HEGGAAGDME AGLLPPTRSD KHCKSSCCGK KKQEKVMKPH HGHSGCCDKK QKENVKIVRK SCDSGCCGSG NKTQQPDQDE
801: GCHDMLSEEI RLDVVSVTGC CSRPAEHVVA SLKVKSNGHF ESSKEDKEET CSEVKMNCGN RERSHSHDHH HA
Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)
001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E
Arabidopsis Description
HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.