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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69827 Canola plasma membrane 48.39 88.25
Bra024449.1-P Field mustard cytosol 90.95 87.82
CDY51090 Canola cytosol 73.28 77.39
CDY62400 Canola plasma membrane 56.74 74.77
CDY30170 Canola cytosol, peroxisome, plasma membrane 56.4 74.06
CDY69511 Canola plasma membrane 45.34 72.77
AT2G19110.2 Thale cress cytosol 73.8 72.35
CDX68625 Canola plasma membrane 45.95 72.33
CDY28206 Canola plasma membrane 42.82 68.24
CDY51647 Canola golgi, plasma membrane, vacuole 20.45 67.92
CDY08717 Canola cytosol, nucleus, plasma membrane 91.47 67.42
CDX68627 Canola cytosol, plasma membrane, vacuole 44.04 66.75
CDY28160 Canola cytosol 44.04 66.75
VIT_11s0103g00370.t01 Wine grape plasma membrane 41.6 66.57
CDX68623 Canola cytosol, endoplasmic reticulum, plasma membrane 30.72 64.65
CDY72630 Canola golgi, plasma membrane, vacuole 19.5 64.37
CDY51690 Canola cytosol, plasma membrane, vacuole 9.31 62.57
CDY51646 Canola cytosol, plasma membrane, vacuole 10.53 62.05
KRH02816 Soybean plasma membrane 38.56 59.22
GSMUA_Achr5P22660_001 Banana plasma membrane 39.34 55.32
TraesCS7B01G320900.1 Wheat plasma membrane 36.73 55.09
HORVU5Hr1G094430.8 Barley endoplasmic reticulum, plasma membrane 33.16 49.8
KRH19069 Soybean plasma membrane 46.65 48.91
GSMUA_Achr8P24660_001 Banana cytosol 39.6 48.35
TraesCS7A01G420000.1 Wheat plasma membrane 39.08 47.82
GSMUA_Achr5P21940_001 Banana extracellular, plasma membrane 38.9 47.81
TraesCS7D01G412800.1 Wheat plasma membrane 39.25 47.72
TraesCS5B01G388000.1 Wheat plasma membrane 34.12 47.29
TraesCS5A01G383400.1 Wheat plasma membrane 33.25 46.81
HORVU7Hr1G097210.4 Barley plasma membrane 38.38 46.62
TraesCS5D01G392700.1 Wheat plasma membrane 33.94 45.72
TraesCS7D01G412400.1 Wheat plasma membrane 39.86 45.66
TraesCS7A01G419500.1 Wheat plasma membrane 38.99 45.48
HORVU7Hr1G097240.1 Barley plasma membrane 39.6 45.09
TraesCS7B01G320100.2 Wheat plasma membrane 40.03 44.97
Os06t0700700-02 Rice plasma membrane 41.69 44.89
EER90320 Sorghum plasma membrane 40.64 43.69
EER96099 Sorghum cytosol 33.16 42.57
Zm00001d005190_P001 Maize plastid 33.16 42.43
Zm00001d014669_P007 Maize plasma membrane 40.56 42.4
Solyc07g009130.2.1 Tomato plastid 46.82 41.32
EER96100 Sorghum cytosol 33.42 41.16
Zm00001d005189_P001 Maize plasma membrane 34.03 40.56
CDY51648 Canola cytosol 2.35 39.71
Os07t0232900-01 Rice cytosol, nucleus, plasma membrane 34.55 39.54
Zm00001d019226_P003 Maize cytosol 25.59 32.92
CDY26408 Canola golgi, nucleus, plasma membrane 4.53 30.06
CDY67922 Canola cytosol 5.4 26.05
CDY67984 Canola cytosol, peroxisome, plasma membrane 5.31 24.9
CDY67923 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 3.39 23.35
CDX91834 Canola cytosol, peroxisome, plasma membrane 17.06 22.84
CDX92394 Canola plastid 17.23 22.37
CDY16605 Canola plastid 17.23 22.37
CDX75363 Canola plastid 16.97 20.81
CDX75636 Canola mitochondrion 14.8 20.81
CDX69288 Canola plastid 14.71 20.63
CDX93870 Canola endoplasmic reticulum, plasma membrane 13.05 20.55
CDY50771 Canola cytosol 17.75 20.52
CDY39400 Canola cytosol 17.84 20.52
CDX68986 Canola plastid 16.62 20.41
CDY34353 Canola mitochondrion 17.41 19.38
CDY49160 Canola cytosol 16.36 19.32
CDY50396 Canola cytosol 16.36 19.32
CDY25498 Canola mitochondrion 17.15 19.05
CDY46080 Canola plastid 10.97 18.67
CDY69037 Canola cytosol 7.75 15.24
CDY67659 Canola cytosol 7.75 14.96
Protein Annotations
Gene3D:2.70.150.20MapMan:24.1.2.1.1Gene3D:3.30.70.100Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078HGF6
UniProt:A0A078HGF6InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY36489
ProteinID:CDY36489ProteinID:CDY36489.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0006812GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0019829GO:GO:0030001GO:GO:0046872
GO:GO:0099132EnsemblPlantsGene:GSBRNA2T00062157001InterPro:HAD-like_sfInterPro:HAD_sfInterPro:HMA_domInterPro:HMA_dom_sf
InterPro:IPR006121InterPro:IPR023214InterPro:IPR023299InterPro:P-typ_ATPase_IBPFAM:PF00122PFAM:PF00702
PRINTS:PR00119ScanProsite:PS00154PFscan:PS50846PANTHER:PTHR43338InterPro:P_typ_ATPaseSUPFAM:SSF55008
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01512TIGRFAMs:TIGR01525
TMHMM:TMhelixUniParc:UPI0004EE899ASEG:seg:::
Description
BnaC03g48480DBnaC03g48480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGF6]
Coordinates
chrLK032377:+:235206..241921
Molecular Weight (calculated)
124954.0 Da
IEP (calculated)
7.255
GRAVY (calculated)
-0.205
Length
1149 amino acids
Sequence
(BLAST)
0001: MELQNEDKNK EEEKKTKKKW QKSYFDVLGI CCSSEVPLIE NILKSLDGVK EYSVIVPSRT VIVVHDSLLI SPFQIAKALN QAKFEANVRV DGKANFKNKW
0101: PSPFAVASGI LLLLSFLKFV YPPLRWIAVA AVAAGIYPIL AKAVASIGRK RVDINILVII TVAATLAMQD YMEAAAVVFL FTIAEWLETR ASYKATAVMQ
0201: SLMSLAPQKA TIAETGEEVE VDEVKVNTIV AVKAGETIPI DGIVVDGNCE VDEKTLTGEA YPVPKQRDST VWAGTINLNG YVSVKTTSLA SDCVVAKMAK
0301: LVEEAQSSKT KSQRLIDKCS QYYTPAIILV SGGIAVVPAV MKLHNLNHWF HLALVVLVSA CPCGLILSTP VATFCALTKA ATSGLLIKSA DYLDTLSKIK
0401: ITAFDKTGTI TRGEFIVIEF RSLSRDISLH NLLYWVSSVE SKSSHPMAAT IVDYAKYVNV EPRTEEVEDY HNFPGEGIYG KIDGNDIYIG NKRIGSRAKC
0501: STVPEIEVDT KGGKTVGYIY VGERLAGVFN LSDACRSGVA QAMKELKDLG IKTAMLTGDN QDAAMHAQEQ LGNAMDVVHG ELLPEDKSKI ILEFKKEGPT
0601: AMVGDGVNDA PALATADIGI SMGISGSALA TQTGHIILMS NDIRRIPQAI RLARRSRRKV VENLFISITL KVGILVLAFT GHPLIWAAVL ADVGTCLLVI
0701: LNSMLLLRDK DKTKNKKCYK ASSTLLNGKK LEGDAEEELD LEAGLLTKTG QCNSGCCGDK KKQEKVKPSS KSSSAHRHSG CCGDKQQQDN VKMTVKESCC
0801: RGKSKILERD LASLRSCNKN LKIKGGSGCC DKKKEKLKET VAKSCCEEKE KNVEMQILVD CNSGSCKKTL KQSSCHEKTC LDTETGGKVG EQSDLEVKNE
0901: RECKSGCCSD ERKQTEEITL ASEEETESLD CSSGCCENKA TVKQSCHENA GLEIEAGDLK LVCCGGDEKQ TGEITMACEE ETDGSDCSST CCGNKEEVEQ
1001: SCHEKACLDI EAGVSCDLKL ACCGNTEGEV KEKLDLEEGL QIKNQGQCMS VCGLKEDGSS SLVGKEREIV KVLSQSSSFC TSPTEVHVKK KKKIEICCKV
1101: KTPEAVACGS IKCKEREKRH IGKSCCRSYA KEYCTHRHHH HHHHHVGAV
Best Arabidopsis Sequence Match ( AT2G19110.2 )
(BLAST)
0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA
Arabidopsis Description
HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.