Factsheet for TraesCS7D01G412800.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G420000.1	Wheat	plasma membrane	93.23	93.82
TraesCS7B01G320900.1	Wheat	plasma membrane	75.56	93.21
HORVU7Hr1G097210.4	Barley	plasma membrane	89.21	89.11
TraesCS7D01G412400.1	Wheat	plasma membrane	75.77	71.39
Os06t0700700-02	Rice	plasma membrane	73.97	65.51
EER90320	Sorghum	plasma membrane	73.76	65.2
Zm00001d014669_P007	Maize	plasma membrane	73.44	63.15
GSMUA_Achr5P22660_001	Banana	plasma membrane	54.39	62.91
VIT_11s0103g00370.t01	Wine grape	plasma membrane	45.82	60.31
TraesCS5D01G392700.1	Wheat	plasma membrane	51.85	57.44
CDY51647	Canola	golgi, plasma membrane, vacuole	20.95	57.23
AT4G30120.1	Thale cress	cytosol	32.49	56.64
GSMUA_Achr8P24660_001	Banana	cytosol	55.34	55.58
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	54.29	54.87
CDY28160	Canola	cytosol	43.92	54.75
CDX68627	Canola	cytosol, plasma membrane, vacuole	43.81	54.62
CDY69827	Canola	plasma membrane	36.4	54.6
Bra011165.1-P	Field mustard	cytosol	43.7	54.49
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	44.02	54.45
KRH02816	Soybean	plasma membrane	42.65	53.88
CDY72630	Canola	golgi, plasma membrane, vacuole	19.37	52.59
Bra011164.1-P	Field mustard	cytosol, plasma membrane	48.25	52.29
CDY69511	Canola	plasma membrane	39.37	51.96
CDY62400	Canola	plasma membrane	47.51	51.49
CDY30170	Canola	cytosol, peroxisome, plasma membrane	47.62	51.43
CDY51690	Canola	cytosol, plasma membrane, vacuole	9.21	50.88
CDX68625	Canola	plasma membrane	38.94	50.41
CDY51646	Canola	cytosol, plasma membrane, vacuole	10.26	49.74
Bra024107.1-P	Field mustard	plasma membrane	45.5	48.7
AT4G30110.1	Thale cress	plasma membrane	48.68	48.37
CDY28206	Canola	plasma membrane	35.56	46.6
KRH37273	Soybean	cytosol, plasma membrane, vacuole	43.49	46.44
CDX68623	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.61	44.32
KRH19069	Soybean	plasma membrane	50.69	43.7
CDY51090	Canola	cytosol	46.56	40.44
CDY36489	Canola	cytosol	47.72	39.25
AT2G19110.2	Thale cress	cytosol	47.62	38.4
Bra024449.1-P	Field mustard	cytosol	46.67	37.06
Solyc07g009130.2.1	Tomato	plastid	50.05	36.33
Bra038842.1-P	Field mustard	cytosol	47.2	35.09
CDY08717	Canola	cytosol, nucleus, plasma membrane	48.04	29.12
TraesCS7D01G467100.1	Wheat	cytosol	22.75	21.48
TraesCS6D01G146500.1	Wheat	cytosol	22.43	21.24
TraesCS7D01G428700.1	Wheat	plastid	18.52	21.19
TraesCS4D01G292300.2	Wheat	plastid	19.89	21.15
TraesCS7D01G237500.1	Wheat	plastid	21.27	21.11
TraesCS6D01G153600.1	Wheat	cytosol	22.22	21.08
TraesCS2D01G407800.5	Wheat	plastid	21.59	20.4
CDY51648	Canola	cytosol	1.16	16.18

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS01229	PFscan:PS50846
PANTHER:PTHR43338	PANTHER:PTHR43338:SF2	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7D01G412800
EnsemblPlants:TraesCS7D01G412800.1	TIGR:cd00371	TIGR:cd02079	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:-:531082809..531089409

Molecular Weight (calculated)

100001.0 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.029

Length

945 amino acids

Sequence
(BLAST)

001: MAAGKQEKSY FDVLGICCPS EVPLVEKLLE PLAGVHKVTV VVPSRTVIVV HDAATISQSQ IVKALNQARL EASVRAYGGA GQNKINKWPS PYVLLCGVLL
101: VASLFQHFWH PLRWLALVAT AAGLPPIVLR SVAAARRLTL DVNILMLIAV GGAVALKDYS EAGFIVFLFT TAEWLETRAS CKATAGMSSL MSMAPQNAVL
201: AETGQVVAAQ DVKVNTVIAV KAGEVVPIDG VVVDGRSEVD EQTLTGESFP VAKQTDSEVW AGTLNIDGYI SVRTTAMADN SAVAKMARLV EEAQNSRSET
301: QRLIDTCAKY YTPAVIVMAA AVAATPVIVR AHNLRHWFQL ALVLLVSACP CALVLSTPVA TFCALLKAAR TGLLIKGGDV LESLAGIKVA AFDKTGTISS
401: GEFSVAEFRA IGERVPRHQL LNWVSSVESR SSHPMAAALV DYARSNSVEP NSENVMEFQI YPGEGIYGEI DGQGVYIGNR RILSRASCET VPEVNDIKGV
501: TVGYVACNKE LVGLFGLSDV CRTGSAEAIR ELRSMGIKSV MLTGDSAAAA TYAQNQLGNV LAEVHSELLP EDKVRIVDEL KARDGSTLMI GDGMNDAPAL
601: ARADVGVSMG VSGSAVAMET SHVTLMSNDV RRIPKAIRLA RRTRRTIVTN IVFSVATKLA IVGLALAGHP LVWAAVLADV GTCLLVIMYS MMLLRGGDGG
701: RGKKCCASSH HGSHSHPKKH GHCSDGPCNL TGGCADSSAG GHACGDDHHH HGHGDGKEPG IPHLPHKHGC EDHHGHGHSH CKEPSKLHPT DSHHCRDHGQ
801: GHHHGKEASS QLVTSKNISH GHGQCKEKHD EHHTNSAEAV QEHSILIDAS AADQQQIQCS HQSGEHEEES CGHHAKAKAC APAPADCCDT VRDEGCGTKA
901: GGVCSSRRAG GAAGETRRCC RSTRASRCGG GGHASMLKLP EIVVE

Best Arabidopsis Sequence Match ( AT2G19110.1 )
(BLAST)

0001: MALQNKEEEK KKVKKLQKSY FDVLGICCTS EVPIIENILK SLDGVKEYSV IVPSRTVIVV HDSLLISPFQ IAKALNEARL EANVRVNGET SFKNKWPSPF
0101: AVVSGLLLLL SFLKFVYSPL RWLAVAAVAA GIYPILAKAF ASIKRPRIDI NILVIITVIA TLAMQDFMEA AAVVFLFTIS DWLETRASYK ATSVMQSLMS
0201: LAPQKAIIAE TGEEVEVDEV KVDTVVAVKA GETIPIDGIV VDGNCEVDEK TLTGEAFPVP KQRDSTVWAG TINLNGYICV KTTSLAGDCV VAKMAKLVEE
0301: AQSSKTKSQR LIDKCSQYYT PAIILVSACV AIVPVIMKVH NLKHWFHLAL VVLVSGCPCG LILSTPVATF CALTKAATSG LLIKSADYLD TLSKIKIVAF
0401: DKTGTITRGE FIVIDFKSLS RDINLRSLLY WVSSVESKSS HPMAATIVDY AKSVSVEPRP EEVEDYQNFP GEGIYGKIDG NDIFIGNKKI ASRAGCSTVP
0501: EIEVDTKGGK TVGYVYVGER LAGFFNLSDA CRSGVSQAMA ELKSLGIKTA MLTGDNQAAA MHAQEQLGNV LDVVHGDLLP EDKSRIIQEF KKEGPTAMVG
0601: DGVNDAPALA TADIGISMGI SGSALATQTG NIILMSNDIR RIPQAVKLAR RARRKVVENV CLSIILKAGI LALAFAGHPL IWAAVLVDVG TCLLVIFNSM
0701: LLLREKKKIG NKKCYRASTS KLNGRKLEGD DDYVVDLEAG LLTKSGNGQC KSSCCGDKKN QENVVMMKPS SKTSSDHSHP GCCGDKKEEK VKPLVKDGCC
0801: SEKTRKSEGD MVSLSSCKKS SHVKHDLKMK GGSGCCASKN EKGKEVVAKS CCEKPKQQVE SVGDCKSGHC EKKKQAEDIV VPVQIIGHAL THVEIELQTK
0901: ETCKTSCCDS KEKVKETGLL LSSENTPYLE KGVLIKDEGN CKSGSENMGT VKQSCHEKGC SDEKQTGEIT LASEEETDDQ DCSSGCCVNE GTVKQSFDEK
1001: KHSVLVEKEG LDMETGFCCD AKLVCCGNTE GEVKEQCRLE IKKEEHCKSG CCGEEIQTGE ITLVSEEETE STNCSTGCCV DKEEVTQTCH EKPASLVVSG
1101: LEVKKDEHCE SSHRAVKVET CCKVKIPEAC ASKCRDRAKR HSGKSCCRSY AKELCSHRHH HHHHHHHHHV SA

Arabidopsis Description

HMA4Putative cadmium/zinc-transporting ATPase HMA4 [Source:UniProtKB/Swiss-Prot;Acc:O64474]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.