Factsheet for AT4G30120.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72630	Canola	golgi, plasma membrane, vacuole	52.58	81.9
CDY51646	Canola	cytosol, plasma membrane, vacuole	29.34	81.54
CDY51690	Canola	cytosol, plasma membrane, vacuole	24.91	78.95
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	90.22	64.01
CDY28160	Canola	cytosol	88.56	63.32
CDX68627	Canola	cytosol, plasma membrane, vacuole	88.38	63.19
Bra011165.1-P	Field mustard	cytosol	88.38	63.19
CDY51647	Canola	golgi, plasma membrane, vacuole	37.82	59.25
VIT_11s0103g00370.t01	Wine grape	plasma membrane	65.13	49.16
AT4G30110.1	Thale cress	plasma membrane	71.22	40.59
KRH02816	Soybean	plasma membrane	55.9	40.51
TraesCS7B01G320900.1	Wheat	plasma membrane	56.83	40.21
GSMUA_Achr5P22660_001	Banana	plasma membrane	57.56	38.19
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	52.95	37.52
TraesCS5A01G383400.1	Wheat	plasma membrane	52.58	34.93
TraesCS5B01G388000.1	Wheat	plasma membrane	52.95	34.62
TraesCS5D01G392700.1	Wheat	plasma membrane	53.14	33.76
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	57.2	33.16
TraesCS7A01G420000.1	Wheat	plasma membrane	56.83	32.8
AT2G19110.2	Thale cress	cytosol	70.85	32.76
TraesCS7D01G412800.1	Wheat	plasma membrane	56.64	32.49
GSMUA_Achr8P24660_001	Banana	cytosol	56.27	32.41
KRH19069	Soybean	plasma membrane	64.39	31.84
HORVU7Hr1G097210.4	Barley	plasma membrane	55.54	31.82
EER96099	Sorghum	cytosol	51.48	31.17
Zm00001d005190_P001	Maize	plastid	51.48	31.07
TraesCS7A01G419500.1	Wheat	plasma membrane	55.9	30.76
TraesCS7D01G412400.1	Wheat	plasma membrane	56.83	30.71
HORVU7Hr1G097240.1	Barley	plasma membrane	56.46	30.33
EER96100	Sorghum	cytosol	52.03	30.23
TraesCS7B01G320100.2	Wheat	plasma membrane	56.64	30.01
EER90320	Sorghum	plasma membrane	58.86	29.84
Os06t0700700-02	Rice	plasma membrane	57.56	29.24
Zm00001d005189_P001	Maize	plasma membrane	51.29	28.84
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	53.32	28.78
Zm00001d014669_P007	Maize	plasma membrane	57.38	28.3
Solyc07g009130.2.1	Tomato	plastid	62.18	25.88
Zm00001d019226_P003	Maize	cytosol	32.66	19.82
AT5G44790.1	Thale cress	cytosol	29.34	15.88
AT5G21930.1	Thale cress	plastid	24.91	15.29
AT4G37270.1	Thale cress	plasma membrane, plastid	21.4	14.16
AT1G63440.1	Thale cress	mitochondrion	25.28	13.77
AT4G33520.2	Thale cress	plastid	23.8	13.59
CDY51648	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:829135
ProteinID:AEE85723.1	ProteinID:ANM66569.1	ArrayExpress:AT4G30120	EnsemblPlantsGene:AT4G30120	RefSeq:AT4G30120	TAIR:AT4G30120
RefSeq:AT4G30120-TAIR-G	EnsemblPlants:AT4G30120.1	TAIR:AT4G30120.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EMBL:AY434730	ProteinID:CAB43847.1	ProteinID:CAB81005.1	EMBL:DQ446885	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0006812	GO:GO:0006950	GO:GO:0008150	GO:GO:0008551	GO:GO:0016020	GO:GO:0016021
GO:GO:0016463	GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0070574
GO:GO:0071577	GO:GO:0071585	GO:GO:0099132	InterPro:HAD_sf	Symbol:HMA3	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	RefSeq:NP_001328455.1	RefSeq:NP_194741.2
InterPro:P-typ_ATPase_IB	UniProt:P0CW77	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	ScanProsite:PS00154
PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0000162B4F	SEG:seg

Description

HMA3Putative inactive cadmium/zinc-transporting ATPase HMA3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW77]

Coordinates

chr4:-:14730215..14733628

Molecular Weight (calculated)

58645.6 Da

IEP (calculated)

7.539

GRAVY (calculated)

0.355

Length

542 amino acids

Sequence
(BLAST)

001: MAEGEESKKM NLQTSYFDVV GICCSSEVSI VGNVLRQVDG VKEFSVIVPS RTVIVVHDTF LISPLQIVKA LNQARLEASV RPYGETSLKS QWPSPFAIVS
101: GVLLVLSFFK YFYSPLEWLA IVAVVAGVFP ILAKAVASVT RFRLDINALT LIAVIATLCM QDFTEAATIV FLFSVADWLE SSAAHKASIV MSSLMSLAPR
201: KAVIADTGLE VDVDEVGINT VVSVKAGESI PIDGVVVDGS CDVDEKTLTG ESFPVSKQRE STVMAATINL NGYIKVKTTA LARDCVVAKM TKLVEEAQKS
301: QTKTQRFIDK CSRYYTPAVV VSAACFAVIP VLLKVQDLSH WFHLALVVLV SGCPCGLILS TPVATFCALT KAATSGFLIK TGDCLETLAK IKIVAFDKTG
401: TITKAEFMVS DFRSLSPSIN LHKLLYWVSS IECKSSHPMA AALIDYARSV SVEPKPDIVE NFQNFPGEGV YGRIDGQDIY IGNKRIAQRA GCLTDNVPDI
501: EATMKRGKTI GYIYMGAKLT GSFNLLDGCR YGVAQALKEL KS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.