Factsheet for Bra011165.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28160	Canola	cytosol	99.34	99.34
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	89.84	89.14
AT4G30120.1	Thale cress	cytosol	63.19	88.38
VIT_11s0103g00370.t01	Wine grape	plasma membrane	59.1	62.4
Bra011164.1-P	Field mustard	cytosol, plasma membrane	67.28	58.49
KRH02816	Soybean	plasma membrane	55.28	56.02
Bra024107.1-P	Field mustard	plasma membrane	64.91	55.72
TraesCS7B01G320900.1	Wheat	plasma membrane	54.75	54.18
GSMUA_Achr5P22660_001	Banana	plasma membrane	55.8	51.77
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	49.21	48.76
TraesCS5A01G383400.1	Wheat	plasma membrane	49.74	46.2
TraesCS5B01G388000.1	Wheat	plasma membrane	50.26	45.96
TraesCS5D01G392700.1	Wheat	plasma membrane	50.13	44.55
TraesCS7A01G420000.1	Wheat	plasma membrane	54.88	44.3
TraesCS7D01G412800.1	Wheat	plasma membrane	54.49	43.7
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	53.56	43.42
GSMUA_Achr8P24660_001	Banana	cytosol	53.43	43.04
HORVU7Hr1G097210.4	Barley	plasma membrane	53.69	43.02
TraesCS7A01G419500.1	Wheat	plasma membrane	55.54	42.74
TraesCS7D01G412400.1	Wheat	plasma membrane	56.07	42.37
KRH19069	Soybean	plasma membrane	61.21	42.34
HORVU7Hr1G097240.1	Barley	plasma membrane	55.54	41.72
Bra024449.1-P	Field mustard	cytosol	65.44	41.68
TraesCS7B01G320100.2	Wheat	plasma membrane	55.8	41.35
EER96099	Sorghum	cytosol	48.81	41.34
Zm00001d005190_P001	Maize	plastid	48.94	41.31
EER90320	Sorghum	plasma membrane	56.73	40.22
Os06t0700700-02	Rice	plasma membrane	56.6	40.21
EER96100	Sorghum	cytosol	49.08	39.87
Bra038842.1-P	Field mustard	cytosol	66.23	39.5
Zm00001d005189_P001	Maize	plasma membrane	48.81	38.38
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	50.79	38.35
Zm00001d014669_P007	Maize	plasma membrane	55.41	38.22
Solyc07g009130.2.1	Tomato	plastid	59.23	34.49
Zm00001d019226_P003	Maize	cytosol	35.62	30.24
Bra002374.1-P	Field mustard	plastid	24.54	21.02
Bra011750.1-P	Field mustard	plastid	22.43	20.78
Bra025102.1-P	Field mustard	cytosol	27.31	20.76
Bra027573.1-P	Field mustard	cytosol	26.78	20.26
Bra039194.1-P	Field mustard	plastid	20.58	20.16
Bra003110.1-P	Field mustard	cytosol	24.01	18.63
Bra011450.1-P	Field mustard	plastid	22.69	18.3
Bra027641.1-P	Field mustard	mitochondrion	25.2	16.02

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra011165	EnsemblPlants:Bra011165.1	EnsemblPlants:Bra011165.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M4D3W1
InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
ScanProsite:PS01229	PFscan:PS50846	PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01512	TIGRFAMs:TIGR01525	TMHMM:TMhelix
UniParc:UPI0002546F8C	SEG:seg	:	:	:	:

Description

AT2G19110 (E=1e-284) HMA4 | HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter

Coordinates

chrA01:+:3566551..3569690

Molecular Weight (calculated)

81467.2 Da

IEP (calculated)

6.055

GRAVY (calculated)

0.254

Length

758 amino acids

Sequence
(BLAST)

001: MADGEDTTKK NLQTSYFDVV GICCSMEVPL VGDVLRPLNG VKEFSVIVPS RTVIVVHDSF LISPLQIVKA LNEARLEASV RPYGETSFKS QWPSPFALVS
101: GVLLALSFLK YFYGLLEWFA VVAVVAGVYP ILAKAVASVT RFRLDINALT LIAVIATVCM EDYTEAATIV FLFSVADWLE SSAAHKASTV MSSLMNLAPR
201: KAVIVETGIE VDVDEVGLNT VVSVKAGESI PIDGVVVDGS CDVDEKTLTG ESFPVSKQRD SPVLAATINL NGYIKVKTTV LARDCVVAKM TKLVEEAQKS
301: QTKTQRFIDK CSRYYTPAVV VVAACFALIP VLLKAQNLSH WFHLALVVLV SGCPCGLILS TPVATFCALT KAATSGFLIK TGDCLETLAK IKIAAFDKTG
401: TITKAEFTVS DFQSLSHNIN LQHLIYWVSS IESKSSHPMA EALIDYARSV SVEPKPDMVE NFQNFPGEGV YGRIDGQDIY IGNKRIAKRA GCLTVPDSEA
501: DMKGGKTIGY IYIGEELTGS FSLLDGCRHG VAQALKELKF LGITTAMLTG DNRDAAMSIQ QQLGNALDIA HTELLPQDKA RIIDEFKSQG PTMMVGDGLN
601: DAPALAKADI GISMGISGSA LATETGDIIL MSNDLRKIPK GMRLARRCHK KVIENVVLSV SIKGAIMVLG FAGYPLIWAA VLADAGTCLL VILNSMMLLR
701: DEREAVSACY RASPSSCTPS LLKLEEDLEV GLLQKSEETS NKSCCSGCCG GPKGTQQK

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.