Factsheet for Bra024107.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30170	Canola	cytosol, peroxisome, plasma membrane	91.73	92.57
Bra011164.1-P	Field mustard	cytosol, plasma membrane	81.2	82.22
AT4G30110.1	Thale cress	plasma membrane	80.63	74.87
Bra011165.1-P	Field mustard	cytosol	55.72	64.91
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	55.95	64.66
VIT_11s0103g00370.t01	Wine grape	plasma membrane	51.64	63.51
KRH02816	Soybean	plasma membrane	47.79	56.42
TraesCS7B01G320900.1	Wheat	plasma membrane	46.66	53.79
GSMUA_Achr5P22660_001	Banana	plasma membrane	48.24	52.14
Bra024449.1-P	Field mustard	cytosol	69.54	51.6
Bra038842.1-P	Field mustard	cytosol	70.67	49.1
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	41.79	48.24
GSMUA_Achr8P24660_001	Banana	cytosol	49.04	46.01
TraesCS7A01G420000.1	Wheat	plasma membrane	48.81	45.9
GSMUA_Achr5P21940_001	Banana	extracellular, plasma membrane	48.58	45.88
TraesCS7D01G412800.1	Wheat	plasma membrane	48.7	45.5
TraesCS5B01G388000.1	Wheat	plasma membrane	42.36	45.11
KRH19069	Soybean	plasma membrane	55.95	45.07
TraesCS5A01G383400.1	Wheat	plasma membrane	41.45	44.85
HORVU7Hr1G097210.4	Barley	plasma membrane	47.45	44.29
TraesCS5D01G392700.1	Wheat	plasma membrane	42.13	43.61
TraesCS7D01G412400.1	Wheat	plasma membrane	49.38	43.47
TraesCS7A01G419500.1	Wheat	plasma membrane	48.36	43.35
HORVU7Hr1G097240.1	Barley	plasma membrane	48.7	42.62
TraesCS7B01G320100.2	Wheat	plasma membrane	48.7	42.03
Os06t0700700-02	Rice	plasma membrane	49.72	41.14
Zm00001d005190_P001	Maize	plastid	41.34	40.65
EER96099	Sorghum	cytosol	41.0	40.45
EER90320	Sorghum	plasma membrane	48.92	40.41
EER96100	Sorghum	cytosol	42.47	40.19
Zm00001d005189_P001	Maize	plasma membrane	42.81	39.21
Zm00001d014669_P007	Maize	plasma membrane	48.36	38.85
Os07t0232900-01	Rice	cytosol, nucleus, plasma membrane	43.71	38.45
Solyc07g009130.2.1	Tomato	plastid	54.36	36.87
Zm00001d019226_P003	Maize	cytosol	31.48	31.13
Bra002374.1-P	Field mustard	plastid	20.84	20.79
Bra025102.1-P	Field mustard	cytosol	22.88	20.26
Bra011750.1-P	Field mustard	plastid	18.69	20.17
Bra027573.1-P	Field mustard	cytosol	22.54	19.86
Bra039194.1-P	Field mustard	plastid	17.21	19.64
Bra003110.1-P	Field mustard	cytosol	21.06	19.04
Bra011450.1-P	Field mustard	plastid	19.82	18.62
Bra027641.1-P	Field mustard	mitochondrion	21.97	16.28

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra024107	EnsemblPlants:Bra024107.1	EnsemblPlants:Bra024107.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0019829
GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:HMA_dom
InterPro:HMA_dom_sf	InterPro:IPR006121	InterPro:IPR023214	InterPro:IPR023299	UniProt:M4E5Q3	InterPro:P-typ_ATPase_IB
PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PFscan:PS50846
PANTHER:PTHR43338	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI0002540DAB	SEG:seg	:	:

Description

AT4G30110 (E=7e-199) HMA2 | HMA2; cadmium-transporting ATPase

Coordinates

chrA03:-:27577185..27582612

Molecular Weight (calculated)

95213.4 Da

IEP (calculated)

7.477

GRAVY (calculated)

-0.090

Length

883 amino acids

Sequence
(BLAST)

001: MASKNDKKMT KSYFDVLGIC CTSEVPLIEN ILKSLDGIKK YSVIVPSRTV IVVHDSLIIS QFHIVKALNQ ARLEANVRVT GETNFKNKWP SPFAVVSGVL
101: LLLSFFKYLY SPFRWLAVAA VVAGIYPILA KSIASIARTR IDINVLVVIT VGATLGMQDY TEAAAVVFLF TIAEWLQSRA SYKVFTSTIS CYASYQGYCD
201: LIKCWFQASA VMQSLMSLSP QKAVIAETGE EVEVDELKIN TIIAVKAGET IPIDGVVVDG NCEVDEKTLT GEAFPVPKLR DSTVWAGTIN LNGYITVKTT
301: SLAEDCVVAK MAKLVEEAQN SKTETQRFID QCSKYYTPVA TFCALTKAAT SGLLIKGADY LETLAKIKTV AFDKTGTITR GEFIVTDFKS ISRDISLHSL
401: LYWVSSVESK SSHPMASALV DYAKSVSVEP KPEAVEDYQN FPGEGIYGKI DGKEVYIGNK RIASRAGCSS VPDTDVDTKG GKTVGYVYVG ETLAGSFNLS
501: DACRSGVAQA MKELKSLGIK TAMLTGDNQA AARHAQEQLG NAIDIIHAEL LPEGKSEIIK EFKREGPTAM VGDGLNDAPA LATADIGISM GISGSALATE
601: TGNIILMSND IRRIPQAIRL ARRAKRKVVE NVVLSITMKG AILGLAFAGY PLIWAAVLAD VGTCLLVILN SMLLLRDKQK GGNKCYRSSS SPCVLNAEKH
701: EGDAAGDMEA GLLPPTRSDK HCKSSCCGKK NREKVMKPHH GHSGCCDKKQ KDNVKIVRKS CDSGCCGSGN KTQQPDQDEG CHDMPSEEIR LDVGDGGDCK
801: SVCCGTGTIQ QEGSSNLVNV DGEVKVSVKG CCSRPAEHVV ASLKVKSNGH CESSKEDKEE TCSEVKMNCG SRERSHSHDH HHA

Best Arabidopsis Sequence Match ( AT4G30110.2 )
(BLAST)

001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E

Arabidopsis Description

HMA2Cadmium/zinc-transporting ATPase HMA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZW4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.