Factsheet for Bra027573.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003234.1-P
Bra007230.1-P
Bra014702.1-P
Bra029854.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44790.1	Bra029854.1-P	AT1G66240.1	17223078
AT5G44790.1	Bra003234.1-P	AT3G56240.1	17223078
AT5G44790.1	Bra007230.1-P	AT3G56240.1	17223078
AT5G44790.1	Bra014702.1-P	AT3G56240.1	17223078

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69037	Canola	cytosol	57.58	98.8
CDY67659	Canola	cytosol	57.29	96.47
Bra025102.1-P	Field mustard	cytosol	88.02	88.47
AT5G44790.1	Thale cress	cytosol	86.33	86.41
KRH58516	Soybean	cytosol	72.65	73.24
VIT_01s0011g01360.t01	Wine grape	cytosol	72.95	73.1
KRH12191	Soybean	cytosol	72.26	72.69
KRH42397	Soybean	cytosol	71.76	72.33
KRH37212	Soybean	cytosol	71.06	72.21
Solyc02g068490.2.1	Tomato	cytosol	72.16	72.08
PGSC0003DMT400024409	Potato	cytosol	72.06	72.06
GSMUA_Achr8P06970_001	Banana	cytosol	63.37	67.27
GSMUA_Achr5P26800_001	Banana	cytosol	62.18	66.56
Zm00001d027860_P001	Maize	plasma membrane	11.08	66.07
EES06348	Sorghum	cytosol	65.67	66.0
Os02t0172600-00	Rice	cytosol	65.57	65.63
TraesCS6D01G146500.1	Wheat	cytosol	65.27	65.53
TraesCS6A01G156900.1	Wheat	cytosol	65.07	65.4
KXG20553	Sorghum	plasma membrane	65.47	65.14
TraesCS7A01G480100.1	Wheat	cytosol	65.07	65.13
Zm00001d053783_P001	Maize	plasma membrane	64.87	65.13
TraesCS7D01G467100.1	Wheat	cytosol	64.97	65.03
Os06t0665800-01	Rice	cytosol	65.07	65.0
TraesCS7B01G382300.1	Wheat	cytosol	64.77	64.84
TraesCS6B01G184800.1	Wheat	cytosol	62.67	64.61
Zm00001d011553_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	11.38	62.3
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	62.87	61.58
Zm00001d046953_P002	Maize	cytosol, endoplasmic reticulum, plasma membrane	61.18	59.28
HORVU6Hr1G031960.1	Barley	plastid	29.24	51.05
Bra003110.1-P	Field mustard	cytosol	45.21	46.37
Bra027641.1-P	Field mustard	mitochondrion	45.71	38.42
Bra002374.1-P	Field mustard	plastid	26.75	30.28
Bra011450.1-P	Field mustard	plastid	26.75	28.51
Bra024103.1-P	Field mustard	peroxisome, plasma membrane, vacuole	20.66	27.09
Bra011165.1-P	Field mustard	cytosol	20.26	26.78
Bra011164.1-P	Field mustard	cytosol, plasma membrane	20.76	23.85
Bra039194.1-P	Field mustard	plastid	17.76	23.0
Bra024107.1-P	Field mustard	plasma membrane	19.86	22.54
Bra011750.1-P	Field mustard	plastid	17.86	21.88
Bra024449.1-P	Field mustard	cytosol	19.76	16.64
Bra038842.1-P	Field mustard	cytosol	20.46	16.13

Protein Annotations

Gene3D:2.70.150.20	MapMan:24.1.2.1.1	Gene3D:3.30.70.100	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:Bra027573	EnsemblPlants:Bra027573.1	EnsemblPlants:Bra027573.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0019829	GO:GO:0030001	GO:GO:0046872	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121
InterPro:IPR023214	InterPro:IPR023299	UniProt:M4EFL1	InterPro:P-typ_ATPase_IB	PFAM:PF00122	PFAM:PF00403
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00942	ScanProsite:PS00154	ScanProsite:PS01047	PFscan:PS50846
PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	InterPro:P_typ_ATPase	SUPFAM:SSF55008	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR00003	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01525	TMHMM:TMhelix	UniParc:UPI00025426F2
SEG:seg	:	:	:	:	:

Description

AT5G44790 (E=0.0) RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter

Coordinates

chrA09:+:13258982..13263588

Molecular Weight (calculated)

107203.0 Da

IEP (calculated)

4.696

GRAVY (calculated)

0.232

Length

1002 amino acids

Sequence
(BLAST)

0001: MAPSRRDIQL TRITGHSLGS SDAENEEMEG VRLLDSYDDD EENAHFLSKI EGGSGDSVLK KIQVGITGMT CAACSNAVEG ALMSVNGVFK ASVALLQNRA
0101: DVVFDPNLIK EEDIKEAIED AGFEAEILAD PVTAGTKTTL VGQFTIGGMT CAACVNSVEG ILKDLPGVKR AVVALATSLG EVEYDPNLIN KDDIITAIED
0201: AGFEGSLVQS NQQDKLLLRV DGVLNELDAQ VLEGILTRLN GVRQFRVDSL SGELDVVFDP EVVNSRTLVD DIEGEGYGKF KLRVMSPYER LTSKDTGEAS
0301: KMFRRFICSL SLAIPLFCIQ VICPYIAALN NVLVWRCGPF MMSDWFKWGL VSIIQFVIGK RFYVAAWRAL RNGSTNMDVL VALGTSASYF YSVGALLYGA
0401: VTGFWSPTYF DASAMLITFV LLGKYLESLA KGKTSDAMKK LVQLTPATAV LLIEGKGEKF VGEREIDALL IQPGDSLKVV PGGKIPADGV VVWGSSYVNE
0501: SMVTGESVPV SKEVGSPVIG GTINTHGALH IKATKVGSDA VLSQIISLVE TAQMSKAPIQ QFADYVASIF VPVVVTLSLI TLVGWSIAGA VGGYPEEWIP
0601: ENGTHFVFSL MFSISVVVIA CPCALGLATP TAVMVATGVG ATNGVLIKGG DALEKAHKLK YIIFDKTGTL TQGKATVTTA KVFSEMDRGE FLTLVASAEA
0701: SSEHPLAKAI VDYASQFHST DESAEDGRES QNSGWLLDTS DFSALPGKGI QCLVNNRMIL VGNRKLMSEN SITIPDHVDK FVGELEESAR TGVIVAYNSE
0801: LVGVMGIADP LKREAPMVVE LLRRMGVRSI MVTGDNWRTA RAVAKEVGIE DVRAEVMPAG KAEVVRSLQK DGSTVGMVGD GINDSPALAA ADVGMAIGAG
0901: TDVAIEAADY VLMRNNLEDV IIAIDLSRKT LTRIRMNYVF AMAYNVVSIP IAAGVFFPLL RVQLPPWAAG ACMALSSVSV VCSSLLLRRY KKPSLNTIMA
1001: NE

Best Arabidopsis Sequence Match ( AT5G44790.1 )
(BLAST)

0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E

Arabidopsis Description

RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.