Factsheet for HORVU6Hr1G031960.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69037	Canola	cytosol	49.83	48.97
CDY67659	Canola	cytosol	50.0	48.24
TraesCS6B01G184800.1	Wheat	cytosol	80.84	47.74
TraesCS6D01G146500.1	Wheat	cytosol	81.01	46.59
TraesCS6A01G156900.1	Wheat	cytosol	80.14	46.14
EES06348	Sorghum	cytosol	70.38	40.52
Os02t0172600-00	Rice	cytosol	70.56	40.46
Zm00001d053783_P001	Maize	plasma membrane	69.69	40.08
HORVU7Hr1G108890.1	Barley	cytosol, mitochondrion	63.59	35.68
GSMUA_Achr5P26800_001	Banana	cytosol	55.75	34.19
GSMUA_Achr8P06970_001	Banana	cytosol	54.7	33.26
Solyc02g068490.2.1	Tomato	cytosol	53.48	30.61
KRH37212	Soybean	cytosol	52.44	30.53
PGSC0003DMT400024409	Potato	cytosol	53.14	30.44
KRH12191	Soybean	cytosol	52.79	30.42
VIT_01s0011g01360.t01	Wine grape	cytosol	52.96	30.4
AT5G44790.1	Thale cress	cytosol	52.26	29.97
CDY50771	Canola	cytosol	51.74	29.88
CDY39400	Canola	cytosol	51.92	29.83
KRH58516	Soybean	cytosol	51.57	29.78
Bra025102.1-P	Field mustard	cytosol	51.57	29.69
KRH42397	Soybean	cytosol	51.05	29.48
Bra027573.1-P	Field mustard	cytosol	51.05	29.24
HORVU6Hr1G033380.2	Barley	cytosol	29.44	17.12
HORVU2Hr1G097010.1	Barley	plasma membrane	14.63	12.5
HORVU5Hr1G094430.8	Barley	endoplasmic reticulum, plasma membrane	10.98	8.24
HORVU4Hr1G076330.4	Barley	golgi, mitochondrion	8.71	8.05
HORVU7Hr1G097210.4	Barley	plasma membrane	10.63	6.45
HORVU7Hr1G097240.1	Barley	plasma membrane	11.32	6.44
HORVU0Hr1G009080.5	Barley	mitochondrion, plasma membrane	7.84	5.91
HORVU7Hr1G100160.2	Barley	plastid	7.32	4.82
HORVU5Hr1G066370.30	Barley	golgi, mitochondrion, peroxisome	5.23	4.35
CDY26408	Canola	golgi, nucleus, plasma membrane	1.22	4.05
HORVU7Hr1G048770.2	Barley	endoplasmic reticulum, plasma membrane	0.7	1.27
CDY67984	Canola	cytosol, peroxisome, plasma membrane	0.35	0.82

Protein Annotations

Gene3D:2.70.150.20	Gene3D:3.30.70.100	MapMan:35.1	UniProt:A0A287TU06	GO:GO:0003674	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0030001	GO:GO:0046872	InterPro:HMA_Cu_ion-bd	InterPro:HMA_dom	InterPro:HMA_dom_sf	EnsemblPlantsGene:HORVU6Hr1G031960
EnsemblPlants:HORVU6Hr1G031960.1	InterPro:Heavy-metal-associated_CS	InterPro:IPR006121	PFAM:PF00403	PRINTS:PR00942	ScanProsite:PS01047
PFscan:PS50846	PANTHER:PTHR43520	PANTHER:PTHR43520:SF14	SUPFAM:SSF55008	TIGRFAMs:TIGR00003	TMHMM:TMhelix
UniParc:UPI000B47C3CF	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:137850548..137856116

Molecular Weight (calculated)

61550.9 Da

IEP (calculated)

6.454

GRAVY (calculated)

0.129

Length

574 amino acids

Sequence
(BLAST)

001: RHYPQHFQKR PRNPRGVSDP PLASRTITPI AFPGLLGRSP LHNSHFPFPF IPLRTIASPR LASPPPSLTA MAHLQLTAVA GGRDDEMEEV ALLGSYDEPE
101: GLSSRTGQEE EEEEDAGMRR AQVRVTGMTC SACTGAVEAA LSARRGVRSA AVSLLQNRAH VVFDPALAKE EDIVEAIEDA GFEAEILPDS AVSQPKSQKA
201: LSGQFRIGGM TCAACVNSVE GILKKLPGVN RAVVALATSL GEVEYDPAAI SKDEIVQAIE DAGFEAALLQ SSEQDKALLG LIGLHTERDV NLLYDILRKT
301: EGLCQFDVNS VRAEVEITFD PEVVGLRSIV DIIEIESSGR LKAHVQNPYV RSSSNDAQEA SKMLHLLRSS LFLSIPVFFM RMVCPHISFI NSFLLMHCGP
401: FRIGDLLKWM LVSVVQFVVG KRFYVAAYRA LRHGSTNMDV LVVLGTTATY VYSVCALLYG AFTGFHPPMY FETSAMIITF VLLGKYLEVL AKGRTSDAIK
501: KLVELVPATA ILLLKYKDGK YAGEKEIDAL LIQPGDVLKV LPGSKIPAXX XXXXXXXLLM VSSLGVQAML MKVW

Best Arabidopsis Sequence Match ( AT1G63440.1 )
(BLAST)

001: MATKLLSLTC IRKERFSERY PLVRKHLTRS RDGGGGSSSE TAAFEIDDPI SRAVFQVLGM TCSACAGSVE KAIKRLPGIH DAVIDALNNR AQILFYPNSV
101: DVETIRETIE DAGFEASLIE NEANERSRQV CRIRINGMTC TSCSSTIERV LQSVNGVQRA HVALAIEEAE IHYDPRLSSY DRLLEEIENA GFEAVLISTG
201: EDVSKIDLKI DGELTDESMK VIERSLEALP GVQSVEISHG TDKISVLYKP DVTGPRNFIQ VIESTVFGHS GHIKATIFSE GGVGRESQKQ GEIKQYYKSF
301: LWSLVFTVPV FLTAMVFMYI PGIKDLLMFK VINMLTVGEI IRCVLATPVQ FVIGWRFYTG SYKALRRGSA NMDVLIALGT NAAYFYSLYT VLRAATSPDF
401: KGVDFFETSA MLISFIILGK YLEVMAKGKT SQAIAKLMNL APDTAILLSL DKEGNVTGEE EIDGRLIQKN DVIKIVPGAK VASDGYVIWG QSHVNESMIT
501: GEARPVAKRK GDTVIGGTLN ENGVLHVKVT RVGSESALAQ IVRLVESAQL AKAPVQKLAD RISKFFVPLV IFLSFSTWLA WFLAGKLHWY PESWIPSSMD
601: SFELALQFGI SVMVIACPCA LGLATPTAVM VGTGVGASQG VLIKGGQALE RAHKVNCIVF DKTGTLTMGK PVVVKTKLLK NMVLREFYEL VAATEVNSEH
701: PLAKAIVEYA KKFRDDEENP AWPEACDFVS ITGKGVKATV KGREIMVGNK NLMNDHKVII PDDAEELLAD SEDMAQTGIL VSINSELIGV LSVSDPLKPS
801: AREAISILKS MNIKSIMVTG DNWGTANSIA REVGIDSVIA EAKPEQKAEK VKELQAAGHV VAMVGDGIND SPALVAADVG MAIGAGTDIA IEAADIVLMK
901: SNLEDVITAI DLSRKTFSRI RLNYVWALGY NLMGIPIAAG VLFPGTRFRL PPWIAGAAMA ASSVSVVCCS LLLKNYKRPK KLDHLEIREI QVERV

Arabidopsis Description

HMA5Probable copper-transporting ATPase HMA5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.