Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G335400.1 | |
| TraesCS7B01G247000.1 | |
| TraesCS7D01G342900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G44790.1 | TraesCS7A01G335400.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7B01G247000.1 | AT1G66240.1 | 17223078 |
| AT5G44790.1 | TraesCS7D01G342900.1 | AT1G66240.1 | 17223078 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G146500.1 | Wheat | cytosol | 98.7 | 98.6 |
| TraesCS6B01G184800.1 | Wheat | cytosol | 95.79 | 98.25 |
| Os02t0172600-00 | Rice | cytosol | 87.16 | 86.81 |
| EES06348 | Sorghum | cytosol | 86.56 | 86.56 |
| Zm00001d053783_P001 | Maize | plasma membrane | 85.66 | 85.57 |
| TraesCS7A01G480100.1 | Wheat | cytosol | 83.15 | 82.82 |
| HORVU6Hr1G031960.1 | Barley | plastid | 46.14 | 80.14 |
| GSMUA_Achr8P06970_001 | Banana | cytosol | 73.62 | 77.75 |
| GSMUA_Achr5P26800_001 | Banana | cytosol | 72.22 | 76.92 |
| CDY67984 | Canola | cytosol, peroxisome, plasma membrane | 17.35 | 70.61 |
| VIT_01s0011g01360.t01 | Wine grape | cytosol | 70.51 | 70.3 |
| KRH37212 | Soybean | cytosol | 69.01 | 69.78 |
| KRH12191 | Soybean | cytosol | 69.61 | 69.68 |
| KRH58516 | Soybean | cytosol | 69.21 | 69.42 |
| KRH42397 | Soybean | cytosol | 68.51 | 68.71 |
| AT5G44790.1 | Thale cress | cytosol | 68.71 | 68.43 |
| Solyc02g068490.2.1 | Tomato | cytosol | 68.81 | 68.39 |
| PGSC0003DMT400024409 | Potato | cytosol | 68.51 | 68.16 |
| CDY50771 | Canola | cytosol | 67.9 | 68.11 |
| CDY39400 | Canola | cytosol | 67.8 | 67.67 |
| Bra025102.1-P | Field mustard | cytosol | 67.3 | 67.3 |
| Bra027573.1-P | Field mustard | cytosol | 65.4 | 65.07 |
| CDY26408 | Canola | golgi, nucleus, plasma membrane | 11.23 | 64.74 |
| CDY69037 | Canola | cytosol | 35.41 | 60.45 |
| CDY67659 | Canola | cytosol | 35.51 | 59.5 |
| TraesCS2A01G410400.3 | Wheat | mitochondrion | 45.74 | 45.1 |
| TraesCS6A01G158900.1 | Wheat | plastid | 43.83 | 44.87 |
| TraesCS7A01G239700.1 | Wheat | cytosol | 27.88 | 34.62 |
| TraesCS4A01G010800.1 | Wheat | mitochondrion | 25.98 | 29.1 |
| TraesCS5A01G383400.1 | Wheat | plasma membrane | 21.36 | 26.1 |
| TraesCS7A01G420000.1 | Wheat | plasma membrane | 21.46 | 22.79 |
| TraesCS7A01G419500.1 | Wheat | plasma membrane | 21.26 | 21.52 |
| TraesCS7A01G439100.1 | Wheat | plastid | 17.55 | 21.14 |
Protein Annotations
| Gene3D:2.70.150.20 | MapMan:24.1.2.1.1 | Gene3D:3.30.70.100 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019829 | GO:GO:0030001 |
| GO:GO:0046872 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:HMA_Cu_ion-bd | InterPro:HMA_dom | InterPro:HMA_dom_sf |
| InterPro:Heavy-metal-associated_CS | InterPro:IPR006121 | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-typ_ATPase_IB | PFAM:PF00122 |
| PFAM:PF00403 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | ScanProsite:PS01047 |
| PFscan:PS50846 | PANTHER:PTHR43520 | PANTHER:PTHR43520:SF14 | InterPro:P_typ_ATPase | SUPFAM:SSF55008 | SUPFAM:SSF56784 |
| SUPFAM:SSF81653 | SUPFAM:SSF81665 | TIGRFAMs:TIGR00003 | TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01525 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G156900 | EnsemblPlants:TraesCS6A01G156900.1 | TIGR:cd00371 | TIGR:cd02094 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:146000677..146005705
Molecular Weight (calculated)
106860.0 Da
IEP (calculated)
5.034
GRAVY (calculated)
0.325
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLQLTAVA GGSDDDMEEV ALLGSYGEAE GPSSRTEEEE EAGMRRAQVR VTGMTCSACT GAVEAALSAR CGVSSAAVSL LQNRAHVVFD PALAKEEDIV
101: EAIEDAGFEA EILPDSAVSQ PKSQKVLSGQ FRIGGMTCAA CVNSVEGILK KLPGVNRAVV ALATSLGEVE YDPTAISKDE IVQAIEDAGF EAALVQSSEQ
201: DKALLGLIGL HTERDVNLLY DILRKTEGLR QFDVNSVRAE VEITFDPEVV GLRSVVDIID MESSGRLKGH VQNPYVRSSS NDAQEASKML HLLRSSLFLS
301: IPVFFMRMVC PHISFINSFL LMHCGPFRIG DLLKWMLVSV VQFVVGKRFY IAAYRALRHG STNMDVLVVL GTTATYVYSV CALLYGAFTG FHPPMYFETS
401: AMIITFVLLG KYLEVLAKGR TSDAIKKLVE LVPATAILLL KYKDGKYAGE KEIDALLIQP GDVLKVLPGS KIPADGIVTW GTSHVDESMV TGESASICKE
501: VSSSVIGGTM NLNGILHIQA AKVGSGTVLS QIISLVETAQ MSKAPIQKFA DYVAGIFVPI VITLSLLTFC TWFVCGTLGA YPNSWVSETS NCFVFSLMFS
601: ISVVVIACPC ALGLATPTAV MVATGVGANH GVLVKGGDAL ERAQNVNYII FDKTGTLTQG KATVTTTKVF SGMDVGDFLT LVASAEASSE HPLAKAILDY
701: AFHFHFFGKL PSSKDDVKKR KEDAFSQWLL EVADFSALPG KGVQCLINGK MILVGNRALI SENGVNIPEE AESFLVDMEL NAKTGILVAY DGNFIGLMGV
801: TDPLKREAAV VIEGLKKMGI YPVMVTGDNW RTALAVAKEI GIEDVRAEVM PAGKADVIRI FQKDGSVVAM VGDGINDSPA LAAADVGMAI GAGTDIAIEA
901: ADYVLVRNNL EDVITAIDLS RKTFSRIRWN YFFAMAYNIV AIPVAAGALF PFTGLQMPPW LAGACMAFSS VSVVCSSLLL RRYRKPRLTT VLQITVE
101: EAIEDAGFEA EILPDSAVSQ PKSQKVLSGQ FRIGGMTCAA CVNSVEGILK KLPGVNRAVV ALATSLGEVE YDPTAISKDE IVQAIEDAGF EAALVQSSEQ
201: DKALLGLIGL HTERDVNLLY DILRKTEGLR QFDVNSVRAE VEITFDPEVV GLRSVVDIID MESSGRLKGH VQNPYVRSSS NDAQEASKML HLLRSSLFLS
301: IPVFFMRMVC PHISFINSFL LMHCGPFRIG DLLKWMLVSV VQFVVGKRFY IAAYRALRHG STNMDVLVVL GTTATYVYSV CALLYGAFTG FHPPMYFETS
401: AMIITFVLLG KYLEVLAKGR TSDAIKKLVE LVPATAILLL KYKDGKYAGE KEIDALLIQP GDVLKVLPGS KIPADGIVTW GTSHVDESMV TGESASICKE
501: VSSSVIGGTM NLNGILHIQA AKVGSGTVLS QIISLVETAQ MSKAPIQKFA DYVAGIFVPI VITLSLLTFC TWFVCGTLGA YPNSWVSETS NCFVFSLMFS
601: ISVVVIACPC ALGLATPTAV MVATGVGANH GVLVKGGDAL ERAQNVNYII FDKTGTLTQG KATVTTTKVF SGMDVGDFLT LVASAEASSE HPLAKAILDY
701: AFHFHFFGKL PSSKDDVKKR KEDAFSQWLL EVADFSALPG KGVQCLINGK MILVGNRALI SENGVNIPEE AESFLVDMEL NAKTGILVAY DGNFIGLMGV
801: TDPLKREAAV VIEGLKKMGI YPVMVTGDNW RTALAVAKEI GIEDVRAEVM PAGKADVIRI FQKDGSVVAM VGDGINDSPA LAAADVGMAI GAGTDIAIEA
901: ADYVLVRNNL EDVITAIDLS RKTFSRIRWN YFFAMAYNIV AIPVAAGALF PFTGLQMPPW LAGACMAFSS VSVVCSSLLL RRYRKPRLTT VLQITVE
0001: MAPSRRDLQL TPVTGGSSSQ ISDMEEVGLL DSYHNEANAD DILTKIEEGR DVSGLRKIQV GVTGMTCAAC SNSVEAALMN VNGVFKASVA LLQNRADVVF
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
0101: DPNLVKEEDI KEAIEDAGFE AEILAEEQTQ ATLVGQFTIG GMTCAACVNS VEGILRDLPG VKRAVVALST SLGEVEYDPN VINKDDIVNA IEDAGFEGSL
0201: VQSNQQDKLV LRVDGILNEL DAQVLEGILT RLNGVRQFRL DRISGELEVV FDPEVVSSRS LVDGIEEDGF GKFKLRVMSP YERLSSKDTG EASNMFRRFI
0301: SSLVLSIPLF FIQVICPHIA LFDALLVWRC GPFMMGDWLK WALVSVIQFV IGKRFYVAAW RALRNGSTNM DVLVALGTSA SYFYSVGALL YGAVTGFWSP
0401: TYFDASAMLI TFVLLGKYLE SLAKGKTSDA MKKLVQLTPA TAILLTEGKG GKLVGEREID ALLIQPGDTL KVHPGAKIPA DGVVVWGSSY VNESMVTGES
0501: VPVSKEVDSP VIGGTINMHG ALHMKATKVG SDAVLSQIIS LVETAQMSKA PIQKFADYVA SIFVPVVITL ALFTLVGWSI GGAVGAYPDE WLPENGTHFV
0601: FSLMFSISVV VIACPCALGL ATPTAVMVAT GVGATNGVLI KGGDALEKAH KVKYVIFDKT GTLTQGKATV TTTKVFSEMD RGEFLTLVAS AEASSEHPLA
0701: KAIVAYARHF HFFDESTEDG ETNNKDLQNS GWLLDTSDFS ALPGKGIQCL VNEKMILVGN RKLMSENAIN IPDHVEKFVE DLEESGKTGV IVAYNGKLVG
0801: VMGIADPLKR EAALVVEGLL RMGVRPIMVT GDNWRTARAV AKEVGIEDVR AEVMPAGKAD VIRSLQKDGS TVAMVGDGIN DSPALAAADV GMAIGAGTDV
0901: AIEAADYVLM RNNLEDVITA IDLSRKTLTR IRLNYVFAMA YNVVSIPIAA GVFFPVLRVQ LPPWAAGACM ALSSVSVVCS SLLLRRYKKP RLTTVLKITT
1001: E
Arabidopsis Description
RAN1Copper-transporting ATPase RAN1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7J8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.